RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 IGKV1D-16P01601 117 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 HTN3P15516 51 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 HLA-DRB3P79483 266 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 TMEM183BQ1AE95 376 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 EBLN2Q6P2I7 272 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 CLRN3Q8NCR9 226 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 OR10G8Q8NGN5 311 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 ZNF714Q96N38 554 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 TLNRD1Q9H1K6 362 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 PIKFYVEQ9Y2I7 2098 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 CDCP2Q5VXM1 449 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 TJP1Q07157 1748 aa11.98□□□□□ -0.49
VAPA-202ENST00000400000 LMX1BO60663 402 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CLDN18P56856 261 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 GLRX2Q9NS18 164 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CACFD1Q9UGQ2 172 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CLDN34H7C241 214 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 IL13RA2Q14627 380 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 SLIRPQ9GZT3 109 aaKnown RBP11.97□□□□□ -0.49
VAPA-202ENST00000400000 PAM16Q9Y3D7 125 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 APCSP02743 223 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CTSBP07858 339 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 SP9P0CG40 484 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CXCL3P19876 107 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 PEAR1Q5VY43 1037 aaPredicted RBP11.97□□□□□ -0.49
VAPA-202ENST00000400000 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 CENPVQ7Z7K6 275 aaPredicted RBP11.97□□□□□ -0.49
VAPA-202ENST00000400000 FOXC2Q99958 501 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 MIEN1Q9BRT3 115 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 HERVK_113P61574 105 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 VN1R17PQ8TDU5 208 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 LPAR3Q9UBY5 353 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 SNURFLB1AK76 121 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 IGHV4-34P06331 123 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 FCGR2BP31994 310 aaPredicted RBP11.97□□□□□ -0.49
VAPA-202ENST00000400000 SSBP1Q04837 148 aaKnown RBP11.97□□□□□ -0.49
VAPA-202ENST00000400000 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 ZNF721Q8TF20 911 aa11.97□□□□□ -0.49
VAPA-202ENST00000400000 ANKRD20A5PA0PJZ0 165 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 IGSF23A1L1A6 192 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 KIR2DL2P43627 348 aaPredicted RBP11.96□□□□□ -0.49
VAPA-202ENST00000400000 ZNF519Q8TB69 540 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 A0A1W2PQF6 199 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 MBPP02686 304 aaPredicted RBP11.96□□□□□ -0.49
VAPA-202ENST00000400000 GP1BAP07359 652 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
VAPA-202ENST00000400000 RIGQ13278 110 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 GMPPAQ96IJ6 420 aaPredicted RBP11.96□□□□□ -0.49
VAPA-202ENST00000400000 ST6GAL2Q96JF0 529 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.49
VAPA-202ENST00000400000 AWAT1Q58HT5 328 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 CLLU1Q5K131 121 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 SEC11CQ9BY50 192 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
VAPA-202ENST00000400000 SNRNP200O75643 2136 aaKnown RBP11.96□□□□□ -0.5
VAPA-202ENST00000400000 SS18L1O75177 396 aaPredicted RBP11.96□□□□□ -0.5
VAPA-202ENST00000400000 ADIPOQQ15848 244 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 C10orf111Q8N326 155 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 TMEM251Q8N6I4 163 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 SCMH1Q96GD3 660 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 A0A0J9YW62 118 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 TMEM74BQ9NUR3 256 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 F5P12259 2224 aa11.96□□□□□ -0.5
VAPA-202ENST00000400000 TRPM3Q9HCF6 1732 aaPredicted RBP11.95□□□□□ -0.5
VAPA-202ENST00000400000 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 A0A1W2PP11 408 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 A0A1W2PPV9 198 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 AP4M1O00189 453 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 UCP2P55851 309 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 RUNX1Q01196 453 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 EWSR1Q01844 656 aaKnown RBP eCLIP11.95□□□□□ -0.5
VAPA-202ENST00000400000 ASB5Q8WWX0 329 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 PHYHIPLQ96FC7 376 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 THY1P04216 161 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 HERPUD1Q15011 391 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 GABRA6Q16445 453 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 FADS6Q8N9I5 356 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 PGLYRP3Q96LB9 341 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 STRCQ7RTU9 1775 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 SCTP09683 121 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 GPA33Q99795 319 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 A0A1B0GU03 582 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 DHRS7CA6NNS2 312 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
VAPA-202ENST00000400000 NEU1Q99519 415 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 TMEM229AB2RXF0 380 aa11.95□□□□□ -0.5
VAPA-202ENST00000400000 CD160O95971 181 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms