RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GCGP01275 180 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 LIFP15018 202 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 GPM6AP51674 278 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 CEACAM16Q2WEN9 425 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 Q6ZS49 121 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
APOB-202ENST00000399256 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
APOB-202ENST00000399256 UBE2L5PA0A1B0GUS4 154 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 A0A1W2PR80 420 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 NUBP1P53384 320 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 LRRC75BQ2VPJ9 315 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 BEND2Q8NDZ0 799 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 PSMG3Q9BT73 122 aaPredicted RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 FGF23Q9GZV9 251 aaPredicted RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 SLC39A9Q9NUM3 307 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 PLA2G3Q9NZ20 509 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 IGKV1D-33P01593 117 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 IGKV1-33P01594 117 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 CCNOP22674 350 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 DSCR4P56555 118 aaPredicted RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 KIR2DS1Q14954 304 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 SPANXN5Q5MJ07 72 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 THOC3Q96J01 351 aaKnown RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 FOXB1Q99853 325 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 ERRFI1Q9UJM3 462 aaPredicted RBP11.92□□□□□ -0.5
APOB-202ENST00000399256 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 ATP23Q9Y6H3 246 aa11.92□□□□□ -0.5
APOB-202ENST00000399256 CD300LBA8K4G0 201 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 KBTBD11O94819 623 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 GNB2P62879 340 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 COA6Q5JTJ3 125 aaKnown RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 AAED1Q7RTV5 226 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 OR56B2PQ8NGI1 322 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 CBLN4Q9NTU7 201 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 C19orf25Q9UFG5 118 aaPredicted RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 IGKV1-39P01597 117 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 IGHV3-9P01782 118 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 IGKV1D-39P04432 117 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 CLDN15P56746 228 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 RAB4BP61018 213 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 PAX5Q02548 391 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 TMEM170AQ8WVE7 144 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 IL1F10Q8WWZ1 152 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 SNHG12Q9BXW3 62 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 PARLQ9H300 379 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 PROK2Q9HC23 129 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 ZNF391Q9UJN7 358 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 RARRES3Q9UL19 164 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 HS3ST1O14792 307 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 S100GP29377 79 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 FGF12P61328 243 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 TNFRSF9Q07011 255 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 TRIM61Q5EBN2 209 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 OR8G2PQ6IF36 304 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 SLC23A3Q6PIS1 610 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
APOB-202ENST00000399256 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
APOB-202ENST00000399256 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
APOB-202ENST00000399256 HRASP01112 189 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
APOB-202ENST00000399256 HBG1P69891 147 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 HBG2P69892 147 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 SERF2P84101 59 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 PRDX4Q13162 271 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
APOB-202ENST00000399256 ACY3Q96HD9 319 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 AGMATQ9BSE5 352 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 ZNF407Q9C0G0 2248 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 SOX15O60248 233 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 CCL2P13500 99 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
APOB-202ENST00000399256 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 RDH5Q92781 318 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 TMEM18Q96B42 140 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 ZNF845Q96IR2 970 aaPredicted RBP11.9□□□□□ -0.5
APOB-202ENST00000399256 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
APOB-202ENST00000399256 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms