RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 KCNS2Q9ULS6 477 aa8.45□□□□□ -1.06
PTCHD4-202ENST00000398738 TRBV24-1A0A075B6N3 115 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 GRIFINA4D1Z8 144 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 AQP7P3A6NL99 342 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 MKRN2OSH3BPM6 223 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 M0R143 59 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 NPSP0C0P6 89 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 BCL3P20749 454 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CD38P28907 300 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 MDH2P40926 338 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 PNRC1Q12796 327 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 IL24Q13007 206 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 HERPUD1Q15011 391 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 H1FOOQ8IZA3 346 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 OR2M3Q8NG83 312 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 C8orf33Q9H7E9 229 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 FKBP11Q9NYL4 201 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 VAX2Q9UIW0 290 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CPAMD8Q8IZJ3 1885 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 IGHV1OR21-1A0A087WYE8 117 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 ZNF320A2RRD8 509 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CD300LBA8K4G0 201 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 DRD1P21728 446 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 RND2P52198 227 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 SPINK9Q5DT21 86 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 FAM78BQ5VT40 261 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 FGFBP3Q8TAT2 258 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 ZNF845Q96IR2 970 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 OR4C12Q96R67 309 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 TMEM204Q9BSN7 226 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CISD1Q9NZ45 108 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 MTCH2Q9Y6C9 303 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 KNTC1P50748 2209 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 LILRA5A6NI73 299 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 WDR1O75083 606 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CA11O75493 328 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 TFPI2P48307 235 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 GPM6AP51674 278 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 RBM11P57052 281 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 SRPXP78539 464 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 MRPS21P82921 87 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 EIF3IQ13347 325 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 TDRG1Q3Y452 100 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 TCF23Q7RTU1 214 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 OR10V1Q8NGI7 309 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 PLPPR1Q8TBJ4 325 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 NABP1Q96AH0 204 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 C11orf1Q9H5F2 150 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 PATZ1Q9HBE1 687 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 CDH20Q9HBT6 801 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 MMP17Q9ULZ9 603 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 PAM16Q9Y3D7 125 aa8.44□□□□□ -1.06
PTCHD4-202ENST00000398738 NUPR1O60356 82 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 RBMXL2O75526 392 aaKnown RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 CLDN1O95832 211 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PFN1P07737 140 aaKnown RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 CST2P09228 141 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 CEACAM1P13688 526 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 NMSQ5H8A3 153 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PLXDC1Q8IUK5 500 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 MAML2Q8IZL2 1156 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 ADPRHL1Q8NDY3 354 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR51G1Q8NGK1 321 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR2V1Q8NHB1 315 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 MRPL30Q8TCC3 161 aaKnown RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR6C1Q96RD1 312 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 TBX15Q96SF7 602 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PARLQ9H300 379 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR51I2Q9H344 312 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 FER1L5A0AVI2 2057 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 C1QTNF9BB2RNN3 333 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PGLYRP1O75594 196 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 TRAPPC6AO75865 159 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 PTGDSP41222 190 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 CD81P60033 236 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 BAXQ07812 192 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 IQCJQ1A5X6 159 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 SLC23A3Q6PIS1 610 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR2T10Q8NGZ9 312 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 OR1F12Q8NHA8 337 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 ADGRG7Q96K78 797 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 TMEM56Q96MV1 263 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 MS4A10Q96PG2 267 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 RASL10BQ96S79 203 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 TMEM56-RWDD3S4R434 201 aa8.43□□□□□ -1.06
PTCHD4-202ENST00000398738 DUX1O43812 170 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 PAGE4O60829 102 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 ZFAND5O76080 213 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 IFNA1P01562 189 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 IGKV1D-33P01593 117 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 IGKV1-33P01594 117 aa8.42□□□□□ -1.06
PTCHD4-202ENST00000398738 CD3EP07766 207 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms