RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 HIGD1AQ9Y241 93 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 NRXN2Q9P2S2 1712 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 SSX8Q7RTT4 187 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 TSPAN2O60636 221 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 MPV17LQ2QL34 196 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 CTSDP07339 412 aaPredicted RBP9.84□□□□□ -0.84
TTC28-201ENST00000397906 TEPPQ6URK8 271 aa9.84□□□□□ -0.84
TTC28-201ENST00000397906 ZNF66Q6ZN08 573 aa9.84□□□□□ -0.84
TTC28-201ENST00000397906 ZNF841Q6ZN19 808 aa9.84□□□□□ -0.84
TTC28-201ENST00000397906 LINC00596Q86U02 117 aa9.84□□□□□ -0.84
TTC28-201ENST00000397906 OR4A5Q8NH83 315 aa9.84□□□□□ -0.84
TTC28-201ENST00000397906 SLC6A1P30531 599 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 FAM27BQ5VT28 67 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 NKX2-6A6NCS4 301 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 UBE2L6O14933 153 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 USF1P22415 310 aaPredicted RBP9.83□□□□□ -0.84
TTC28-201ENST00000397906 FAM216AQ8WUB2 273 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 C17orf51A8MQB3 221 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 PRSS1P07477 247 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 VSIG8P0DPA2 414 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 INHBBP09529 407 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 EFNB2P52799 333 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 SFXN3Q9BWM7 321 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
TTC28-201ENST00000397906 SNAI3Q3KNW1 292 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 ASB13Q8WXK3 278 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 CELA3AP09093 270 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 SNRNP40Q96DI7 357 aaKnown RBP9.83□□□□□ -0.84
TTC28-201ENST00000397906 DUX5Q96PT3 197 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 PLAUP00749 431 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 FAM27E3Q08E93 113 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 KLF14Q8TD94 323 aaPredicted RBP9.83□□□□□ -0.84
TTC28-201ENST00000397906 METTL26Q96S19 204 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 TWIST1Q15672 202 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 KHDC3LQ587J8 217 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 TMEM116Q8NCL8 245 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 DHRS7CA6NNS2 312 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 LEUTXA8MZ59 168 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 TMEM50BP56557 158 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 ATP6V1FQ16864 119 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 MMP26Q9NRE1 261 aa9.83□□□□□ -0.84
TTC28-201ENST00000397906 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 MRPL24Q96A35 216 aaKnown RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 RP1L1Q8IWN7 2480 aaPredicted RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 TEX50A0A1B0GTY4 177 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 U3KQ87 197 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 MFNGO00587 321 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SS18L1O75177 396 aaPredicted RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 AURKAIP1Q9NWT8 199 aaPredicted RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 RCC2Q9P258 522 aaKnown RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 C4orf51C9J302 202 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 OGG1O15527 345 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 KIR3DL2P43630 455 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 PCOLCEQ15113 449 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 ANKRD55Q3KP44 614 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 CCL27Q9Y4X3 112 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 NUP214P35658 2090 aaPredicted RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 OR2T8A6NH00 312 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SRSF10O75494 262 aaKnown RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 TTRP02766 147 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SLC25A42Q86VD7 318 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 NFAM1Q8NET5 270 aaPredicted RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 RAB33BQ9H082 229 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TCTAP57738 103 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SEZ6L2Q6UXD5 910 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SLIRPQ9GZT3 109 aaKnown RBP9.82□□□□□ -0.84
TTC28-201ENST00000397906 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 GALP22466 123 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 ZNF273Q14593 569 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TEX29Q8N6K0 151 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 MIOXQ9UGB7 285 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 OR4C45A6NMZ5 311 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SULT1A1P50225 295 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 SCAND1P57086 179 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 OR8G5Q8NG78 346 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TIMP4Q99727 224 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 YAE1D1Q9NRH1 226 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 TMEM167BQ9NRX6 74 aa9.82□□□□□ -0.84
TTC28-201ENST00000397906 THY1P04216 161 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 ASAH2BP0C7U1 165 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 MPV17P39210 176 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 VWA1Q6PCB0 445 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 GPA33Q99795 319 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 LOC389332A0A1B0GUA5 103 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 PRSS54Q6PEW0 395 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 RALYQ9UKM9 306 aaKnown RBP9.81□□□□□ -0.84
TTC28-201ENST00000397906 A0A1B0GU03 582 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 GPHA2Q96T91 129 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 PARD6AQ9NPB6 346 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 OR2D3Q8NGH3 330 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 B2MP61769 119 aa9.81□□□□□ -0.84
TTC28-201ENST00000397906 SLC25A17O43808 307 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms