RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PAGE4O60829 102 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 DEDDO75618 318 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 DKK1O94907 266 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 P04436 131 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 BCL2P10415 239 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MYBPHQ13203 477 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 ATP6V1FQ16864 119 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MRPL54Q6P161 138 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 AAED1Q7RTV5 226 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 UBALD1Q8TB05 177 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MRPL30Q8TCC3 161 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 ABHD5Q8WTS1 349 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF799Q96GE5 643 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MSGN1A6NI15 193 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 OR7C2O60412 319 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 TCTAP57738 103 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 HERPUD1Q15011 391 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 EXT1Q16394 746 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MOB1BQ7L9L4 216 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 NUFIP2Q7Z417 695 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 A0A087WWC5 75 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 C5orf52A6NGY3 159 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 DEGS1O15121 323 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 UCP1P25874 307 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CDC34P49427 236 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 RAC3P60763 192 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 LIN7CQ9NUP9 197 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MRPS18CQ9Y3D5 142 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 PMS2P1A4D2B8 440 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CHST1O43916 411 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 RPS23P62266 143 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CCL7P80098 99 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 LIAT1Q6ZQX7 453 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 MOB3AQ96BX8 217 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 FOXQ1Q9C009 403 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 SDK2Q58EX2 2172 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 TRBV6-6A0A0A6YYG2 114 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 SHISA7A6NL88 538 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 CEACAM1P13688 526 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 GPX4P36969 197 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-205ENST00000397611 SLC25A26Q70HW3 274 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 FADS6Q8N9I5 356 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 NDUFAF3Q9BU61 184 aa4.73□□□□□ -1.65
PTPRD-205ENST00000397611 IGKV1-9A0A0C4DH69 117 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SHISA8B8ZZ34 492 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PPOXP50336 477 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PRSS12P56730 875 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 UBE2NP61088 152 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RPS19BP1Q86WX3 136 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TDHQ8IZJ6 230 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 OR4B1Q8NGF8 309 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 Q8WTZ3 238 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RTN4RQ9BZR6 473 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM242Q9NWH2 141 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 OR6C3Q9NZP0 311 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 HSPB1P04792 205 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 CRYGSP22914 178 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 GNG4P50150 75 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PAFAH1B2P68402 229 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TBC1D26Q86UD7 250 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 FAM216AQ8WUB2 273 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM204Q9BSN7 226 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RIF1Q5UIP0 2472 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TEX50A0A1B0GTY4 177 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 CRYM-AS1A6NIL9 109 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SNURFLB1AK76 121 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 FAM157AC9JC47 383 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RAMP1O60894 148 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 NXPH2O95156 264 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 GDF1P27539 372 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 UQCRFS1P47985 274 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 IL11RAQ14626 422 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 FAM162BQ5T6X4 162 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 COLCA1Q6ZS62 124 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RAB40CQ96S21 281 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF732B4DXR9 585 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 COL10A1Q03692 680 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 OR8B12Q8NGG6 310 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 OR10G8Q8NGN5 311 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SPSB4Q96A44 273 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RTBDNQ9BSG5 229 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SH3BGRL2Q9UJC5 107 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 RER1O15258 196 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 MPPED1O15442 326 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PITX3O75364 302 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 IGHV3-9P01782 118 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 GLIPR1P48060 266 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ID3Q02535 119 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 NHLH1Q02575 133 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SPRED2Q7Z698 418 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 DMRTA2Q96SC8 542 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 HDHD3Q9BSH5 251 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TPSD1Q9BZJ3 242 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms