RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 TCFL5Q9UL49 500 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 MUC22E2RYF6 1773 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-204ENST00000397545 PLCE1Q9P212 2302 aa9.35□□□□□ -0.91
CCDC40-204ENST00000397545 DUXBA0A1W2PPF3 345 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 LIFP15018 202 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 TMEM211Q6ICI0 200 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 RNASEKQ6P5S7 137 aaKnown RBP9.34□□□□□ -0.91
CCDC40-204ENST00000397545 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 BLNKQ8WV28 456 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 AQP3Q92482 292 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 IP6K3Q96PC2 410 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 ABHD14AQ9BUJ0 271 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 CLN8Q9UBY8 286 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 NAT8Q9UHE5 227 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 CBY3A6NI87 242 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 CST2P09228 141 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 BTCP35070 178 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 PSG4Q00888 419 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-204ENST00000397545 SLC24A4Q8NFF2 622 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 MRPL30Q8TCC3 161 aaKnown RBP9.34□□□□□ -0.91
CCDC40-204ENST00000397545 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
CCDC40-204ENST00000397545 OR2W1Q9Y3N9 320 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 ABCA4P78363 2273 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 OPRK1P41145 380 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 RNPS1Q15287 305 aaKnown RBP9.34□□□□□ -0.91
CCDC40-204ENST00000397545 C11orf42Q8N5U0 333 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 ADIPOR1Q96A54 375 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 MPC1Q9Y5U8 109 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 TICRRQ7Z2Z1 1910 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 FER1L5A0AVI2 2057 aa9.34□□□□□ -0.91
CCDC40-204ENST00000397545 MPTX1A8MV57 137 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 RAMP1O60894 148 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 HKR1P10072 659 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 CRISP2P16562 243 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 GNG4P50150 75 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 NSUN5P2Q63ZY6 315 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 WDR74Q6RFH5 385 aaPredicted RBP9.34□□□□□ -0.92
CCDC40-204ENST00000397545 SPNS3Q6ZMD2 512 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 SLC36A1Q7Z2H8 476 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 CARFQ8N187 725 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 RARRES2Q99969 163 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 G6PC2Q9NQR9 355 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 IL36GQ9NZH8 169 aa9.34□□□□□ -0.92
CCDC40-204ENST00000397545 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ACTL6AO96019 429 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 FBP1P09467 338 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 PAX6P26367 422 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 MDH2P40926 338 aaKnown RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 AESQ08117 197 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 CEBPEQ15744 281 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 C1QL2Q7Z5L3 287 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 OR52M1Q8NGK5 317 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 BARX1Q9HBU1 254 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 Q9N2K0 584 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ALPK3Q96L96 1907 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 A0A1W2PPE3 182 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ZNF253O75346 499 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 DEDDO75618 318 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 AGFG2O95081 481 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 RBM11P57052 281 aaKnown RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 SSPNQ14714 243 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 FAM27BQ5VT28 67 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 MOB3BQ86TA1 216 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 OR5D13Q8NGL4 314 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ADAMTS17Q8TE56 1095 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 R3HDM4Q96D70 268 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 SF3B5Q9BWJ5 86 aaKnown RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 FAM206AQ9NX38 181 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 LINC01387J3KSC0 135 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 BPIFB3P59826 476 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 SLC35B1P78383 322 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ZP4Q12836 540 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 WDR25Q64LD2 544 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
CCDC40-204ENST00000397545 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 ZNF519Q8TB69 540 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 CCL17Q92583 94 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 TMEM230Q96A57 120 aa9.33□□□□□ -0.92
CCDC40-204ENST00000397545 TOX3O15405 576 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-204ENST00000397545 HRASP01112 189 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 ORM2P19652 201 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 CSN1S1P47710 185 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 MRGPRGQ86SM5 289 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 KLHDC1Q8N7A1 406 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
CCDC40-204ENST00000397545 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms