RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 LYNX1G3V0Z9 82 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 NXPH2O95156 264 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 IGHV4-39P01824 125 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 LYNX1P0DP58 116 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 DUSP1P28562 367 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 ATP5J2P56134 94 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 LDLRAD3Q86YD5 345 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 BOLLQ8N9W6 283 aaKnown RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 CCDC71LQ8N9Z2 235 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 CABLES2Q9BTV7 478 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 METTL8Q9H825 291 aaKnown RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 TACC2O95359 2948 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 HECTD1Q9ULT8 2610 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 SPG11Q96JI7 2443 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 IGKV1-6A0A0C4DH72 117 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 NPIPB11E5RHQ5 1161 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 TMEM178BH3BS89 294 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 ZNF205O95201 554 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 LHBP01229 141 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 SCTP09683 121 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 PET100P0DJ07 73 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 PAX1P15863 534 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 EGR1P18146 543 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 FXYD4P59646 89 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 HLA-DRB3P79483 266 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 ABCA11PQ4W5N1 156 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 SPIN3Q5JUX0 258 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 LIAT1Q6ZQX7 453 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 MOB1BQ7L9L4 216 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 INO80EQ8NBZ0 244 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 MSI2Q96DH6 328 aaKnown RBP12.44□□□□□ -0.42
CAPN3-207ENST00000397200 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 AQP10Q96PS8 301 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 DCAF16Q9NXF7 216 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 DNAJB11Q9UBS4 358 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 KCNIP3Q9Y2W7 256 aa12.44□□□□□ -0.42
CAPN3-207ENST00000397200 WNT9BO14905 357 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 RLN2P04090 185 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 TK1P04183 234 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 HOXB5P09067 269 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 OR5AC1P0C628 307 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-207ENST00000397200 ATXN7L3Q14CW9 347 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-207ENST00000397200 SMIM21Q3B7S5 101 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
CAPN3-207ENST00000397200 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 DCUN1D4Q92564 292 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 RRNAD1Q96FB5 475 aaKnown RBP12.43□□□□□ -0.42
CAPN3-207ENST00000397200 PERPQ96FX8 193 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 C18orf12Q96KH6 178 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 LURAP1Q96LR2 239 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 CITED4Q96RK1 184 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-207ENST00000397200 ABCA12Q86UK0 2595 aa12.43□□□□□ -0.42
CAPN3-207ENST00000397200 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 H7C1Q1 480 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 SLC33A1O00400 549 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-207ENST00000397200 DEGS1O15121 323 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 DIRAS3O95661 229 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 CD80P33681 288 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 RAB32Q13637 225 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 GGNBP1Q5YKI7 109 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 ACP7Q6ZNF0 438 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 COMMD7Q86VX2 200 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 ARPC5LQ9BPX5 153 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 PCDHB10Q9UN67 800 aa12.42□□□□□ -0.42
CAPN3-207ENST00000397200 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 PPIAL4DF5H284 164 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 HSPB6O14558 160 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 SPDEFO95238 335 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 OR2H2O95918 312 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 WNT2P09544 360 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 GNRHRP30968 328 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-207ENST00000397200 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 NINJ1Q92982 152 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 SLC25A32Q9H2D1 315 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 APCP25054 2843 aa12.41□□□□□ -0.42
CAPN3-207ENST00000397200 OOEPA6NGQ2 149 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 MPPED1O15442 326 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 IFNA21P01568 189 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 ZNF44P15621 663 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 TMEM33P57088 247 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 SRPXP78539 464 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms