RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-204ENST00000396548 GALNT14Q96FL9 552 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF436Q9C0F3 470 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-204ENST00000396548 SHPKQ9UHJ6 478 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 ABCA4P78363 2273 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 FAM172BPA6NC97 362 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 PLA2G2AP14555 144 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 CDKN1AP38936 164 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 HERV-K104P61576 105 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 KCNJ8Q15842 424 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 LPCAT3Q6P1A2 487 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 ARL11Q969Q4 196 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 CRYBG3Q68DQ2 2970 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 EDDM3BP56851 147 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-204ENST00000396548 NLRC3Q7RTR2 1065 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF565Q8N9K5 539 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 CALYQ9NYX4 217 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 CLN8Q9UBY8 286 aa10.51□□□□□ -0.73
TRIM39-204ENST00000396548 DVL1O14640 695 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 ADAM20O43506 726 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 UTF1Q5T230 341 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 DCAF12L2Q5VW00 463 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 OR10V1Q8NGI7 309 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 NAA60Q9H7X0 242 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 CHODLQ9H9P2 273 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 C19orf12Q9NSK7 152 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 MGAT4CQ9UBM8 478 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-204ENST00000396548 MEX3AA1L020 520 aaKnown RBP10.5□□□□□ -0.73
TRIM39-204ENST00000396548 NDUFS7O75251 213 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 DLX6P56179 175 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
TRIM39-204ENST00000396548 CD34P28906 385 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 TMEM187Q14656 261 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 TMEM200BQ69YZ2 307 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 FAM185AQ8N0U4 392 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF295-AS1Q8N0V1 137 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 RTN4IP1Q8WWV3 396 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 DACT3Q96B18 629 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 SLC5A7Q9GZV3 580 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 CLEC4MQ9H2X3 399 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 JPT1Q9UK76 154 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF729A6NN14 1252 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 F5H0A9 414 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 GPR31O00270 319 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 SPINT2O43291 252 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 YPEL1O60688 119 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 IL2RGP31785 369 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 EFNA4P52798 201 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 MSMO1Q15800 293 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 MORN2Q502X0 79 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 PHLDA2Q53GA4 152 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 SP5Q6BEB4 398 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 OR5M8Q8NGP6 311 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 RFESDQ8TAC1 157 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 FAM216AQ8WUB2 273 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 YPEL2Q96QA6 119 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 PHB2Q99623 299 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 TAS2R3Q9NYW6 316 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 PRR13Q9NZ81 148 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 TACC2O95359 2948 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 MPPED1O15442 326 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 IFNA2P01563 188 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 VAMP1P23763 118 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 PPP1CCP36873 323 aaKnown RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 LUMP51884 338 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF273Q14593 569 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
TRIM39-204ENST00000396548 MSI2Q96DH6 328 aaKnown RBP10.49□□□□□ -0.73
TRIM39-204ENST00000396548 TRGV10A0A0A0MS01 117 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 GOSR2O14653 212 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 NDUFB3O43676 98 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 PGLYRP1O75594 196 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-204ENST00000396548 GIPP09681 153 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-204ENST00000396548 ANXA3P12429 323 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 KCTD9Q7L273 389 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF439Q8NDP4 499 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 TP53RKQ96S44 253 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 PAIP2BQ9ULR5 123 aaKnown RBP10.48□□□□□ -0.73
TRIM39-204ENST00000396548 SMLR1H3BR10 107 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 ITGB1BP1O14713 200 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 MMP23AO75900 390 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 C1QBP02746 253 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 ZNF134P52741 427 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 TMEM33P57088 247 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 LRRC10Q5BKY1 277 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 AVPI1Q5T686 147 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 TBC1D26Q86UD7 250 aa10.48□□□□□ -0.73
TRIM39-204ENST00000396548 SGPP2Q8IWX5 399 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms