RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TMEM204Q9BSN7 226 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ID4P47928 161 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LGALS7P47929 136 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM33P57088 247 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 IFITM3Q01628 133 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LYPD8Q6UX82 237 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 C17orf107Q6ZR85 190 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TMUB2Q71RG4 321 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR10V1Q8NGI7 309 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 BCL2L2Q92843 193 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FBXO17Q96EF6 278 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 WDYHV1Q96HA8 205 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PRNDQ9UKY0 176 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 A0A0G2JK05 382 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CCL21O00585 134 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 RBFOX2O43251 390 aaKnown RBP eCLIP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 EFSO43281 561 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 AKR1D1P51857 326 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 HSD17B11Q8NBQ5 300 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CXorf58Q96LI9 332 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PPIAL4EA0A075B759 164 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PQLC2LA1A4F0 135 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PPIAL4DF5H284 164 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 M0R036 132 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SOCS1O15524 211 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FBXO24O75426 580 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 HPRT1P00492 218 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FCGR3AP08637 254 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR5AC1P0C628 307 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PPIAL4FP0DN26 164 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 NAT1P18440 290 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 S100A2P29034 98 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CEACAM6P40199 344 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 COL9A2Q14055 689 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ST3GAL2Q16842 350 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 STPG2Q8N412 459 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR4C13Q8NGP0 309 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 OR5B3Q8NH48 314 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 AQP10Q96PS8 301 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM165Q9HC07 324 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 JPT1Q9UK76 154 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PITPNC1Q9UKF7 332 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PPIAL4AQ9Y536 164 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SETXQ7Z333 2677 aaKnown RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ODAMA1E959 279 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SMCO3A2RU48 225 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 DEFA4P12838 97 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF154Q13106 437 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ACOT6Q3I5F7 207 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FAM209BQ5JX69 171 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM171Q8WVE6 324 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 NEU4Q8WWR8 484 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SLC25A38Q96DW6 304 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 MIOXQ9UGB7 285 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SYNGR2O43760 224 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 PDGFAP04085 211 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 CRYGSP22914 178 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SULT1A1P50225 295 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 MEF2CQ06413 473 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FAM219BQ5XKK7 198 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ST6GAL2Q96JF0 529 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LURAP1Q96LR2 239 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 AMELYQ99218 206 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF71Q9NQZ8 489 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ITPR2Q14571 2701 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM267Q0VDI3 215 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 BAMBIQ13145 260 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 RHOVQ96L33 236 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SRXN1Q9BYN0 137 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 COL12A1Q99715 3063 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TRBV6-6A0A0A6YYG2 114 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FAM90A9PA6NNJ1 464 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SIRPB1O00241 398 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 KRASP01116 189 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SPATA46Q5T0L3 261 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LRTM2Q8N967 370 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SUMF2Q8NBJ7 301 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 RNASE6Q93091 150 aaKnown RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 NCOR1P1Q9H4R4 102 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 IFT22Q9H7X7 185 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TINAGQ9UJW2 476 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SRRM5B3KS81 715 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 HYAL3O43820 417 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 NKX2-5P52952 324 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 RND3P61587 244 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 AKR1C1Q04828 323 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 HLA-DRB5Q30154 266 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 FAM74A3Q4VXF1 159 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 UQCC1Q9NVA1 299 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 MED9Q9NWA0 146 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 A8MV72 311 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 IGHV3-13P01766 116 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 UCP1P25874 307 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 TIGITQ495A1 244 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ANGPTL6Q8NI99 470 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LRRC29Q8WV35 223 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 NABP1Q96AH0 204 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 LRFN3Q9BTN0 628 aa2.91□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF729A6NN14 1252 aaPredicted RBP2.91□□□□□ -1.94
VPS13C-203ENST00000395896 SPRY1O43609 319 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms