RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
SNCA-205ENST00000394991 PITPNAQ00169 270 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 NDPQ00604 133 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 RAB40BQ12829 278 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 ALKBH1Q13686 389 aaKnown RBP12.16□□□□□ -0.46
SNCA-205ENST00000394991 SMN1Q16637 294 aaKnown RBP12.16□□□□□ -0.46
SNCA-205ENST00000394991 Q3ZCU0 254 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 CT45A1Q5HYN5 189 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 TTC23Q5W5X9 447 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 PARP16Q8N5Y8 322 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 OR51A2Q8NGJ7 313 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 CT45A3Q8NHU0 189 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 MYCBPQ99417 103 aaPredicted RBP12.16□□□□□ -0.46
SNCA-205ENST00000394991 IFT22Q9H7X7 185 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
SNCA-205ENST00000394991 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 HSPA12AO43301 675 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 ORC5O43913 435 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 OR7C1O76099 320 aaPredicted RBP12.15□□□□□ -0.46
SNCA-205ENST00000394991 HTR3BO95264 441 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 RSU1Q15404 277 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 HAGHQ16775 308 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 SERPINA12Q8IW75 414 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 OR10V1Q8NGI7 309 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 OR4C12Q96R67 309 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 ANKRD60Q9BZ19 345 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 FAM192AQ9GZU8 254 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 ISG20L2Q9H9L3 353 aaKnown RBP12.15□□□□□ -0.46
SNCA-205ENST00000394991 CHCHD3Q9NX63 227 aaKnown RBP12.15□□□□□ -0.46
SNCA-205ENST00000394991 ERVK13-1Q9NX77 482 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 KIAA1456Q9P272 454 aa12.15□□□□□ -0.46
SNCA-205ENST00000394991 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
SNCA-205ENST00000394991 C12orf77C9JDV5 145 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 LANCL1O43813 399 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 WBP4O75554 376 aaKnown RBP12.14□□□□□ -0.47
SNCA-205ENST00000394991 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 RBM11P57052 281 aaKnown RBP12.14□□□□□ -0.47
SNCA-205ENST00000394991 ACTBP60709 375 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 ECSCRQ19T08 205 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 SATL1Q86VE3 508 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 GPER1Q99527 375 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
SNCA-205ENST00000394991 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 A0A1W2PN81 502 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 GEMIN2O14893 280 aaKnown RBP12.13□□□□□ -0.47
SNCA-205ENST00000394991 CDRT1O95170 752 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 IGHV3-11P01762 117 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 MT-ND4P03905 459 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 CHRNA7P36544 502 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 OGFRL1Q5TC84 451 aaPredicted RBP12.13□□□□□ -0.47
SNCA-205ENST00000394991 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 SYS1Q8N2H4 156 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 RETNQ9HD89 108 aa12.13□□□□□ -0.47
SNCA-205ENST00000394991 MRPS18AQ9NVS2 196 aaKnown RBP12.13□□□□□ -0.47
SNCA-205ENST00000394991 AIPO00170 330 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 NBR2O15453 112 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 ARSBP15848 533 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 CRIP2P52943 208 aaPredicted RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 GBX2P52951 348 aaPredicted RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 ADARB1P78563 741 aaKnown RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 OR1L1Q8NH94 360 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 MRPL20Q9BYC9 149 aaKnown RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 VCXQ9H320 206 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 GNG12Q9UBI6 72 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 STUB1Q9UNE7 303 aa12.12□□□□□ -0.47
SNCA-205ENST00000394991 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
SNCA-205ENST00000394991 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 E9PI62 339 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
SNCA-205ENST00000394991 RAB3AP20336 220 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 CAPGP40121 348 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
SNCA-205ENST00000394991 TSEN15Q8WW01 171 aaKnown RBP12.11□□□□□ -0.47
SNCA-205ENST00000394991 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
SNCA-205ENST00000394991 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 FGF20Q9NP95 211 aaPredicted RBP12.11□□□□□ -0.47
SNCA-205ENST00000394991 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 DHDHQ9UQ10 334 aa12.11□□□□□ -0.47
SNCA-205ENST00000394991 A0A1W2PP11 408 aa12.1□□□□□ -0.47
SNCA-205ENST00000394991 NDUFA3O95167 84 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms