RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 C18orf15Q96N68 181 aa10.72□□□□□ -0.69
SIN3A-202ENST00000394947 FRRS1LQ9P0K9 344 aa10.72□□□□□ -0.69
SIN3A-202ENST00000394947 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
SIN3A-202ENST00000394947 EIF3IQ13347 325 aaKnown RBP10.71□□□□□ -0.69
SIN3A-202ENST00000394947 TMEM211Q6ICI0 200 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 TOMM7Q9P0U1 55 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 SPAARA0A1B0GVQ0 90 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 NDUFB4O95168 129 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 CCL4P13236 92 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 TEPPQ6URK8 271 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 ST6GALNAC6Q969X2 333 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 HSPB2A8KAH6 182 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 CX3CL1P78423 397 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 HSPB2Q16082 182 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 OR11H7Q8NGC8 314 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 CRYGNQ8WXF5 182 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 OPN3Q9H1Y3 402 aaPredicted RBP10.71□□□□□ -0.69
SIN3A-202ENST00000394947 RNF7Q9UBF6 113 aa10.71□□□□□ -0.69
SIN3A-202ENST00000394947 MDC1Q14676 2089 aaKnown RBP10.71□□□□□ -0.7
SIN3A-202ENST00000394947 SPTY2D1-AS1A0A0U1RR47 76 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 PROB1E7EW31 1015 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 CDC42EP2O14613 210 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 RBFOX2O43251 390 aaKnown RBP eCLIP10.71□□□□□ -0.7
SIN3A-202ENST00000394947 ZNF250P15622 560 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 JMJD6Q6NYC1 403 aaPredicted RBP10.71□□□□□ -0.7
SIN3A-202ENST00000394947 ANGPTL4Q9BY76 406 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 PARLQ9H300 379 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM30AQ9NV96 361 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 ELOA3CA0A087WX78 387 aaPredicted RBP10.71□□□□□ -0.7
SIN3A-202ENST00000394947 SAA1P0DJI8 122 aaPredicted RBP10.71□□□□□ -0.7
SIN3A-202ENST00000394947 P2RY1P47900 373 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 PMS2CLQ68D20 193 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 C12orf73Q69YU5 71 aa10.71□□□□□ -0.7
SIN3A-202ENST00000394947 LMO7DNF2Z398 122 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 SSBP1Q04837 148 aaKnown RBP10.7□□□□□ -0.7
SIN3A-202ENST00000394947 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-202ENST00000394947 ABLIM2Q6H8Q1 611 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 CNTRLQ7Z7A1 2325 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 ASPDHA6ND91 283 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 THY1P04216 161 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 VKORC1L1Q8N0U8 176 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 CACNA1CQ13936 2221 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 ANKRD20A5PA0PJZ0 165 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 CEACAM18A8MTB9 384 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 FCARP24071 287 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 PQLC2Q6ZP29 291 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM136Q6ZRR5 245 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 BCL2L10Q9HD36 194 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 ZFP64Q9NPA5 681 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 UBR2Q8IWV8 1755 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 NPFFO15130 113 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 SGMS2Q8NHU3 365 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 A0A0U1RQV5 110 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 SYNGR1O43759 233 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 MRPL30Q8TCC3 161 aaKnown RBP10.7□□□□□ -0.7
SIN3A-202ENST00000394947 DEFB104AQ8WTQ1 72 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
SIN3A-202ENST00000394947 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 PCM1Q15154 2024 aa10.7□□□□□ -0.7
SIN3A-202ENST00000394947 PLPP2O43688 288 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 DNAL4O96015 105 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PPYP01298 95 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 GAPDHP04406 335 aaKnown RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 C19orf48Q6RUI8 117 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 MDP1Q86V88 176 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 CACNA1SQ13698 1873 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 TRGC2P03986 189 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 TYMSP04818 313 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM92Q6UXU6 159 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 BIVMQ86UB2 503 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 C1orf210Q8IVY1 113 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 RNF133Q8WVZ7 376 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 CYB5R3P00387 301 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 MESTQ5EB52 335 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 ZNF770Q6IQ21 691 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 CYB561D1Q8N8Q1 229 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 MVB12AQ96EY5 273 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 GPR82Q96P67 336 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 DCTN5Q9BTE1 182 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 A6NJY4 79 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 COL9A1P20849 921 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 SUMO3P55854 103 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 SLIRPQ9GZT3 109 aaKnown RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 CCL27Q9Y4X3 112 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 IL11P20809 199 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 ANOS1P23352 680 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PRR32B1ATL7 298 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PATE3B3GLJ2 98 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PF4P02776 101 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-202ENST00000394947 OR4A5Q8NH83 315 aa10.69□□□□□ -0.7
SIN3A-202ENST00000394947 RNASEH2CQ8TDP1 164 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms