RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
COL4A6-203ENST00000394872 LYRM2Q9NU23 88 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-203ENST00000394872 METTL1Q9UBP6 276 aaKnown RBP9.03□□□□□ -0.96
COL4A6-203ENST00000394872 MIA3Q5JRA6 1907 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 TSPAN2O60636 221 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 SULT1A1P50225 295 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 Q6ZN92 141 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 PRNTQ86SH4 94 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 RAB33BQ9H082 229 aa9.02□□□□□ -0.96
COL4A6-203ENST00000394872 C1QAP02745 245 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 MELTFP08582 738 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 POLR2AP24928 1970 aaKnown RBP9.02□□□□□ -0.97
COL4A6-203ENST00000394872 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-203ENST00000394872 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 SLC35E3Q7Z769 313 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 VAX2Q9UIW0 290 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 CRHP06850 196 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 CD1BP29016 333 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF107Q9UII5 783 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-203ENST00000394872 HELTA6NFD8 242 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 MGST3O14880 152 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 PDE6DO43924 150 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 NGFRP08138 427 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 CEBPEQ15744 281 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM255AQ5JRV8 349 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 LRP11Q86VZ4 500 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 STXBP6Q8NFX7 210 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 KLHDC2Q9Y2U9 406 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 CACNA1CQ13936 2221 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 DHRS7CA6NNS2 312 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 HPRT1P00492 218 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 PPOXP50336 477 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 ATP5J2P56134 94 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 HLA-DRB5Q30154 266 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 SCGB1D4Q6XE38 83 aa9.02□□□□□ -0.97
COL4A6-203ENST00000394872 HBZP02008 142 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 MMP16P51512 607 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 SPANXN1Q5VSR9 72 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 CDCP2Q5VXM1 449 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 GBGT1Q8N5D6 347 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 GCSAMQ8N6F7 178 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 TDRD15B5MCY1 1934 aaKnown RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 IGKV1-8A0A0C4DH67 115 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 PAGE4O60829 102 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 CYB5R3P00387 301 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 CRISP2P16562 243 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 KIR2DL2P43627 348 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 C16orf92Q96LL3 132 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 PILRAQ9UKJ1 303 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 RNF115Q9Y4L5 304 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 TTRP02766 147 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 PGA4P0DJD7 388 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 RPL27AP46776 148 aaKnown RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 SOSTQ9BQB4 213 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 RCC2Q9P258 522 aaKnown RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 A0A1W2PPC1 479 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 CIDEAO60543 219 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 SMPD2O60906 423 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 SS18L1O75177 396 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 ASAH2BP0C7U1 165 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 ADIPOR1Q96A54 375 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 MARS2Q96GW9 593 aaKnown RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 METTL26Q96S19 204 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 MYO16Q9Y6X6 1858 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 ATAD5Q96QE3 1844 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 A0A0U1RQV5 110 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 C5orf52A6NGY3 159 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 MRPL54Q6P161 138 aaKnown RBP9.01□□□□□ -0.97
COL4A6-203ENST00000394872 ANKRD31Q8N7Z5 1873 aa9.01□□□□□ -0.97
COL4A6-203ENST00000394872 IGHV3OR16-12A0A075B7B8 117 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 IFNL4K9M1U5 179 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 DEDDO75618 318 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 SNRPEP62304 92 aaKnown RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 KLRB1Q12918 225 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 NUP37Q8NFH4 326 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 MYOZ3Q8TDC0 251 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 GUCD1Q96NT3 240 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 DXOO77932 396 aaKnown RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 OR2H2O95918 312 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 TM4SF20Q53R12 229 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CALHM1Q8IU99 346 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 OR10J6PQ8NGY7 276 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 OR4A5Q8NH83 315 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ABHD14BQ96IU4 210 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 PAXXQ9BUH6 204 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 V9GYH0 126 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 SMAD7O15105 426 aaKnown RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF253O75346 499 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 FCGR3AP08637 254 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 COX6A1P12074 109 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF137PP52743 207 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CLDN18P56856 261 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 LY6EQ16553 131 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms