RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 MLF2Q15773 248 aaPredicted RBP10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 CDRT4Q8N9R6 151 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 FAM222BQ8WU58 562 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF524Q96C55 264 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 KLHDC7BQ96G42 594 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 CLEC7AQ9BXN2 247 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 MMP25Q9NPA2 562 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 C19orf53Q9UNZ5 99 aaPredicted RBP10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 COA3Q9Y2R0 106 aaPredicted RBP10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 INSL6Q9Y581 213 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 CACNA1DQ01668 2161 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 NPPCP23582 126 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 GPR1P46091 355 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 PDGFRLQ15198 375 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 KRTCAP3Q53RY4 240 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 C1orf122Q6ZSJ8 110 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 OR2A1Q8NGT9 310 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 OR51E1Q8TCB6 317 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 C11orf40Q8WZ69 217 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 SIGLEC12Q96PQ1 595 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 TRPM6Q9BX84 2022 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 A0A1W2PS18 150 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 CA2P00918 260 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 GPR6P46095 362 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 PRDX1Q06830 199 aaKnown RBP10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 ZIC1Q15915 447 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 CEACAM21Q3KPI0 293 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 TMEM177Q53S58 311 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 OR4C3Q8NH37 302 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 SCGB1C1Q8TD33 95 aa10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 GMPPAQ96IJ6 420 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-203ENST00000394573 SNURFLB1AK76 121 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 M0R1X1 148 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 SLC17A3O00476 420 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PAGE4O60829 102 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 IGKV1D-33P01593 117 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 IGKV1-33P01594 117 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PSMB3P49720 205 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 ROM1Q03395 351 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF90Q03938 601 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF141Q15928 474 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 IZUMO4Q1ZYL8 232 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PLCXD3Q63HM9 321 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 DEFB125Q8N687 156 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 OR5D14Q8NGL3 314 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF721Q8TF20 911 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 CYB5D2Q8WUJ1 264 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 LRRC61Q9BV99 259 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 CEBPBP17676 345 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 CA7P43166 264 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 EGR4Q05215 589 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 FMODQ06828 376 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 GABRA6Q16445 453 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 HLA-DRB5Q30154 266 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PRAMEF5Q5TYX0 476 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PRAMEF6Q5VXH4 476 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 DNM1P34Q6PK57 102 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 WDR82Q6UXN9 313 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 DGAT2L6Q6ZPD8 337 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 PNKDQ8N490 385 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 OR2AE1Q8NHA4 323 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 POM121L2Q96KW2 1035 aa10.75□□□□□ -0.69
SLC28A1-203ENST00000394573 HSPB2A8KAH6 182 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 SRSF10O75494 262 aaKnown RBP10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 SLC35B1P78383 322 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 PMP22Q01453 160 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 TGFBR3Q03167 851 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 HSPB2Q16082 182 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF788Q6ZQV5 615 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 RD3Q7Z3Z2 195 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 TMEM52Q8NDY8 209 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 OR5B3Q8NH48 314 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 OR1E3Q8WZA6 343 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 CRIM1Q9NZV1 1036 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 COL6A3P12111 3177 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 C17orf51A8MQB3 221 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 NRASP01111 189 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 KRASP01116 189 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 MSR1P21757 451 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 YPEL3P61236 119 aaPredicted RBP10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 DEFB132Q7Z7B7 95 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 PRR22Q8IZ63 422 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 SLC38A9Q8NBW4 561 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 TSTD1Q8NFU3 115 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 OR10V1Q8NGI7 309 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 BORCS7Q96B45 105 aa10.74□□□□□ -0.69
SLC28A1-203ENST00000394573 GP6Q9HCN6 339 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms