RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 NPIPB9F8W1W9 429 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 NPIPB7O75200 414 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 MDP1Q86V88 176 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 KCNMB2Q9Y691 235 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 TRGC2P03986 189 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 PPICP45877 212 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 KIR3DL3Q8N743 410 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 P2RX4Q99571 388 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
USP49-203ENST00000394253 NKX2-8O15522 239 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 POLR2GP62487 172 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP49-203ENST00000394253 ZBTB34Q8NCN2 500 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 OR6X1Q8NH79 312 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 C16orf92Q96LL3 132 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 TSPAN32Q96QS1 320 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 PRR14Q9BWN1 585 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 B9D1Q9UPM9 204 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 CYSLTR1Q9Y271 337 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 BCL2L10Q9HD36 194 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 DEGS2Q6QHC5 323 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 Q6ZSR9 355 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 OR1K1Q8NGR3 316 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 ABHD14BQ96IU4 210 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 DAPP1Q9UN19 280 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 TRPM7Q96QT4 1865 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 COL1A1P02452 1464 aaPredicted RBP11.86□□□□□ -0.51
USP49-203ENST00000394253 NAAAQ02083 359 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 OR4A5Q8NH83 315 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 ALKBH3Q96Q83 286 aaPredicted RBP11.86□□□□□ -0.51
USP49-203ENST00000394253 RPS4XP62701 263 aaKnown RBP11.86□□□□□ -0.51
USP49-203ENST00000394253 PLXNA1Q9UIW2 1896 aa11.86□□□□□ -0.51
USP49-203ENST00000394253 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 KLF16Q9BXK1 252 aaPredicted RBP11.85□□□□□ -0.51
USP49-203ENST00000394253 GPR27Q9NS67 375 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 CRYBB2P43320 205 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 CTAG1AP78358 180 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 PUSL1Q8N0Z8 303 aaKnown RBP11.85□□□□□ -0.51
USP49-203ENST00000394253 NPPBP16860 134 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 OR3A4PP47883 348 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 PRSS36Q5K4E3 855 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 TMEM56-RWDD3S4R434 201 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 IDSB3KWA1 339 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 DHCR7Q9UBM7 475 aaKnown RBP11.85□□□□□ -0.51
USP49-203ENST00000394253 J3KRW8 73 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 PRKNO60260 465 aaPredicted RBP11.85□□□□□ -0.51
USP49-203ENST00000394253 CDK2AP2O75956 126 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 CNTFRP26992 372 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 GALNSP34059 522 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 FOXB2Q5VYV0 432 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 TMEM108Q6UXF1 575 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 TCTN3Q6NUS6 607 aa11.85□□□□□ -0.51
USP49-203ENST00000394253 PCDH15Q96QU1 1955 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 ATP5LO75964 103 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 SELENOTP62341 195 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 PTOV1Q86YD1 416 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 PTPMT1Q8WUK0 201 aaPredicted RBP11.84□□□□□ -0.51
USP49-203ENST00000394253 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 H7C1H1 209 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 WNT5AP41221 380 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 ANKRD20A5PA0PJZ0 165 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 EPPINO95925 133 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 VKORC1L1Q8N0U8 176 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
USP49-203ENST00000394253 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 TOX2Q96NM4 488 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 MC5RP33032 325 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
USP49-203ENST00000394253 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 A0A087WUJ7 227 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 TMPRSS2O15393 492 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 HOXD9P28356 352 aaPredicted RBP11.84□□□□□ -0.51
USP49-203ENST00000394253 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 DDB2Q92466 427 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 ARSAP15289 507 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 SCNM1Q9BWG6 230 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 MED29Q9NX70 200 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
USP49-203ENST00000394253 LPAL2Q16609 132 aa11.83□□□□□ -0.51
USP49-203ENST00000394253 RTP2Q5QGT7 225 aa11.83□□□□□ -0.51
USP49-203ENST00000394253 MS4A6EQ96DS6 147 aa11.83□□□□□ -0.51
USP49-203ENST00000394253 HARBI1Q96MB7 349 aa11.83□□□□□ -0.51
USP49-203ENST00000394253 PLXNB2O15031 1838 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms