RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 GPHA2Q96T91 129 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 RAB1BQ9H0U4 201 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 OR2S2Q9NQN1 319 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 PLSCR3Q9NRY6 295 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 CBLN4Q9NTU7 201 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 COMMD9Q9P000 198 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 RALYQ9UKM9 306 aaKnown RBP7.2□□□□□ -1.26
TDP1-203ENST00000393454 UBE2J1Q9Y385 318 aaPredicted RBP7.2□□□□□ -1.26
TDP1-203ENST00000393454 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
TDP1-203ENST00000393454 C3orf85A0A1B0GTC6 90 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 SIGLEC5O15389 551 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 HLA-GP17693 338 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 COL8A2P25067 703 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 PPP1CCP36873 323 aaKnown RBP7.19□□□□□ -1.26
TDP1-203ENST00000393454 PPOXP50336 477 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 PAX5Q02548 391 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 GNMTQ14749 295 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 LRRC37A5PQ49AS3 106 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 FAM53AQ6NSI3 398 aaPredicted RBP7.19□□□□□ -1.26
TDP1-203ENST00000393454 MEX3BQ6ZN04 569 aaKnown RBP7.19□□□□□ -1.26
TDP1-203ENST00000393454 C14orf79Q96F83 325 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 TRAF4Q9BUZ4 470 aaPredicted RBP7.19□□□□□ -1.26
TDP1-203ENST00000393454 SUCNR1Q9BXA5 334 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 PARP12Q9H0J9 701 aaKnown RBP7.19□□□□□ -1.26
TDP1-203ENST00000393454 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 UBTD1Q9HAC8 227 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 RAB18Q9NP72 206 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 OR6C3Q9NZP0 311 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 RNF150Q9ULK6 438 aa7.19□□□□□ -1.26
TDP1-203ENST00000393454 TANC2Q9HCD6 1990 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LRBAP50851 2863 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 G3V3Q6 166 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 C15orf65H3BRN8 121 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 ADAM20O43506 726 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 RGS11O94810 467 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 IFNA21P01568 189 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 SOD3P08294 240 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 TMEM187Q14656 261 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LDLRAD3Q86YD5 345 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 FGFRL1Q8N441 504 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 ZNF843Q8N446 348 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 GALNT14Q96FL9 552 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 GSKIPQ9P0R6 139 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 SLC25A10Q9UBX3 287 aaPredicted RBP7.18□□□□□ -1.26
TDP1-203ENST00000393454 LAMP3Q9UQV4 416 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 TSC22D2O75157 780 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 PGLYRP1O75594 196 aaPredicted RBP7.18□□□□□ -1.26
TDP1-203ENST00000393454 OMGP23515 440 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 RND3P61587 244 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 FGL1Q08830 312 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LAMTOR1Q6IAA8 161 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LYPD2Q6UXB3 125 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 LGI3Q8N145 548 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 GLYATL2Q8WU03 294 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 TP53RKQ96S44 253 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 TMEM246Q9BRR3 403 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 CALYQ9NYX4 217 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 GNG12Q9UBI6 72 aa7.18□□□□□ -1.26
TDP1-203ENST00000393454 MPTX1A8MV57 137 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 NDUFB3O43676 98 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 CD8AP01732 235 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 ZNF16P17020 682 aaPredicted RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 HTD2P86397 168 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 CYCSP99999 105 aaKnown RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 SRSF4Q08170 494 aaKnown RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 LRRC10Q5BKY1 277 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 GGNBP1Q5YKI7 109 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 ZNF695Q8IW36 515 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 ZBTB8BQ8NAP8 495 aaPredicted RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 BVESQ8NE79 360 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 OR51H1Q8NH63 302 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 PPP1R1CQ8WVI7 109 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 H1FXQ92522 213 aaKnown RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 OR10C1Q96KK4 312 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 OR2D2Q9H210 308 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 NCOR1P1Q9H4R4 102 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 RAB9BQ9NP90 201 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
TDP1-203ENST00000393454 MYO18BQ8IUG5 2567 aa7.17□□□□□ -1.26
TDP1-203ENST00000393454 A0A1W2PPR1 153 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 hADV38S2A0JD32 116 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 A6NNC1 897 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 ARPC5O15511 151 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 LY6HO94772 140 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 IGHV3-7P01780 117 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 SSTR2P30874 369 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 SRPXP78539 464 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 IAH1Q2TAA2 248 aaPredicted RBP7.16□□□□□ -1.26
TDP1-203ENST00000393454 LGALSLQ3ZCW2 172 aaPredicted RBP7.16□□□□□ -1.26
TDP1-203ENST00000393454 TMEM268Q5VZI3 342 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 LYZL2Q7Z4W2 148 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 THAP6Q8TBB0 222 aa7.16□□□□□ -1.26
TDP1-203ENST00000393454 MSI2Q96DH6 328 aaKnown RBP7.16□□□□□ -1.26
TDP1-203ENST00000393454 AKR1E2Q96JD6 320 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms