RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PCNX2A6NKB5 2137 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 SP1P08047 785 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 TMEM11P17152 192 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 ELLP55199 621 aaPredicted RBP9.08□□□□□ -0.96
CALD1-203ENST00000393118 RIPPLY2Q5TAB7 128 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 ZNF880Q6PDB4 577 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 PLEKHF2Q9H8W4 249 aa9.08□□□□□ -0.96
CALD1-203ENST00000393118 WIPF3A6NGB9 483 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 IFNA1P01562 189 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 AGAP20933 346 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 SNCAP37840 140 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 EDDM3BP56851 147 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 Q0VFX4 171 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 EIF3IQ13347 325 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 TRIP6Q15654 476 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 CPEB3Q8NE35 698 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 AP1S3Q96PC3 154 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 MS4A10Q96PG2 267 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 NUDT16L1Q9BRJ7 211 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 PPP1R14DQ9NXH3 145 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 H0YL77 283 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 CSRP1P21291 193 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 CCL1P22362 96 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 MDP1Q86V88 176 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 FAM103A1Q9BTL3 118 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 PLK3Q9H4B4 646 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 MSL2Q9HCI7 577 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 IL36RNQ9UBH0 155 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 CACFD1Q9UGQ2 172 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 PKDREJQ9NTG1 2253 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 LRRC3CA6NJW4 275 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 ZNF716A6NP11 495 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 C21orf140B9A014 251 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 CLDN34H7C241 214 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 SH2D1BO14796 132 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 ERVS71-1P61550 626 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
CALD1-203ENST00000393118 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 TP53TG5Q9Y2B4 290 aa9.07□□□□□ -0.96
CALD1-203ENST00000393118 SPAARA0A1B0GVQ0 90 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 CRYM-AS1A6NIL9 109 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 EREGO14944 169 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 MMP9P14780 707 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 ZNF708P17019 499 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 PAX5Q02548 391 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 TMEM211Q6ICI0 200 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 OR52M1Q8NGK5 317 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 OR2J1Q9GZK6 312 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 FBLN5Q9UBX5 448 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 hCG_38984A0A1B0GV85 526 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 KRASP01116 189 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 TMEM267Q0VDI3 215 aaPredicted RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 BAGE2Q86Y30 109 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 RBMXL1Q96E39 390 aaKnown RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 SDSLQ96GA7 329 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 VAMP8Q9BV40 100 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 RIMS4Q9H426 269 aaPredicted RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 ZNF552Q9H707 407 aaPredicted RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 PITPNC1Q9UKF7 332 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 POMT1Q9Y6A1 747 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 BDP1A6H8Y1 2624 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 C9orf172C9J069 976 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 AGFG2O95081 481 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 IGHV3-13P01766 116 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 IGHV3-7P01780 117 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 HKR1P10072 659 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 C5orf24Q7Z6I8 188 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 GGNQ86UU5 652 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 POC1AQ8NBT0 407 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 PARP11Q9NR21 331 aa9.06□□□□□ -0.96
CALD1-203ENST00000393118 SPTAN1Q13813 2472 aaKnown RBP9.06□□□□□ -0.96
CALD1-203ENST00000393118 RPL36A-HNRNPH2H7BZ11 118 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 PPP1CBP62140 327 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 ZNF816Q0VGE8 651 aaPredicted RBP9.05□□□□□ -0.96
CALD1-203ENST00000393118 UNQ6494/PRO21346Q6UXR6 183 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 C22orf15Q8WYQ4 148 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 WBP1Q96G27 269 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 TM2D1Q9BX74 207 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 ZNF703Q9H7S9 590 aaPredicted RBP9.05□□□□□ -0.96
CALD1-203ENST00000393118 SEBOXQ9HB31 216 aaPredicted RBP9.05□□□□□ -0.96
CALD1-203ENST00000393118 STRAPQ9Y3F4 350 aaKnown RBP9.05□□□□□ -0.96
CALD1-203ENST00000393118 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 IGKV1-12A0A0C4DH73 117 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 IGKV1D-12P01611 117 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 CD82P27701 267 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 CEACAM6P40199 344 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 NUBP1P53384 320 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 CD81P60033 236 aa9.05□□□□□ -0.96
CALD1-203ENST00000393118 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
CALD1-203ENST00000393118 NAAAQ02083 359 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms