RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 SOCS1O15524 211 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 TSPAN15O95858 294 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 FAM106CPP0CH98 169 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 IGHV3-43DP0DP04 118 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 ARSBP15848 533 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 PSMD7P51665 324 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 HTD2P86397 168 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 HMGN3Q15651 99 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 RAB11BQ15907 218 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 C2orf76Q3KRA6 126 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 MORN2Q502X0 79 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 Q8N6K4 173 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR10X1Q8NGY0 326 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR56B4Q8NH76 319 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 FAM3DQ96BQ1 224 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 AKR1E2Q96JD6 320 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 NEDD4LQ96PU5 975 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 MMP27Q9H306 513 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 HSF4Q9ULV5 492 aa9.07□□□□□ -0.96
IGHV4-28-201ENST00000390612 IGHV1-3A0A0C4DH29 117 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 CCRL2O00421 344 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 HSD17B6O14756 317 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 SNRNP70P08621 437 aaKnown RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 VSIG10L2P0DP72 767 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 BLVRBP30043 206 aaPredicted RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 FGF9P31371 208 aaPredicted RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 NKAPLQ5M9Q1 402 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 Q6ZTK2 550 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR51D1Q8NGF3 324 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 CAPSLQ8WWF8 208 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 FCGR1BQ92637 280 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 URM1Q9BTM9 101 aaKnown RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 PLGRKTQ9HBL7 147 aa9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
IGHV4-28-201ENST00000390612 IFITM5A6NNB3 132 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 M0QZK8 103 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 YPEL1O60688 119 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 CD28P10747 220 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 CD1BP29016 333 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 RANBP1P43487 201 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 CLDN12P56749 244 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR10A3P58181 314 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 PLA2G7Q13093 441 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 GNMTQ14749 295 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 C2orf68Q2NKX9 166 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 ABCA11PQ4W5N1 156 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 HIST2H2BDQ6DRA6 164 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 ZNF773Q6PK81 442 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 NR2C2APQ86WQ0 139 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 EAF1Q96JC9 268 aaPredicted RBP9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 YPEL2Q96QA6 119 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 RIMS4Q9H426 269 aaPredicted RBP9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR2S2Q9NQN1 319 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 PLSCR3Q9NRY6 295 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 PLEKHJ1Q9NW61 149 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 KCNIP1Q9NZI2 227 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 GNG12Q9UBI6 72 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 STEAP1Q9UHE8 339 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 JPT1Q9UK76 154 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 MOB4Q9Y3A3 225 aa9.05□□□□□ -0.96
IGHV4-28-201ENST00000390612 TNCP24821 2201 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 TMEM272A0A1B0GTI8 110 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 FGF16O43320 207 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 LANCL1O43813 399 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 IL3RAP26951 378 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 REG1BP48304 166 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 CD83Q01151 205 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 TCTEX1D4Q5JR98 221 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 PLAC9Q5JTB6 97 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 PRR18Q8N4B5 295 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR52L2PQ8NGH6 319 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR10V1Q8NGI7 309 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 GALMQ96C23 342 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 TXNL4BQ9NX01 149 aaKnown RBP9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 AK3Q9UIJ7 227 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 RAB22AQ9UL26 194 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 KCNK7Q9Y2U2 307 aa9.04□□□□□ -0.96
IGHV4-28-201ENST00000390612 SH2D7A6NKC9 451 aaPredicted RBP9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 ZNF736B4DX44 427 aaPredicted RBP9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 ITGB1BP1O14713 200 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 PDCD5O14737 125 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 TXNL1O43396 289 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 FBXO24O75426 580 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 LPLP06858 475 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 CSF1P09603 554 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 TMEM11P17152 192 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 RAB3BP20337 219 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 PSMB9P28065 219 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms