RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 FAM90A5PA8MXJ8 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A23PA8MXZ1 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 NMBP08949 121 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A15PP0C7V4 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A13PP0C7W8 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A14PP0C7W9 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 FAM90A24PP0C7X0 464 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 KIR2DS4P43632 304 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 UQCRFS1P47985 274 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 IL13RA2Q14627 380 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 KIR2DS1Q14954 304 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 RPL7L1Q6DKI1 246 aaKnown RBP8.48□□□□□ -1.05
LTN1-203ENST00000389195 ACOT7LQ6ZUV0 252 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 MRGPRGQ86SM5 289 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 COMMD7Q86VX2 200 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 ZNF695Q8IW36 515 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 NMES1Q9C002 83 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 OR2D2Q9H210 308 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 SPACA1Q9HBV2 294 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 WIPI2Q9Y4P8 454 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 TNCP24821 2201 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 IL2RGP31785 369 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 RPL30P62888 115 aaKnown RBP8.48□□□□□ -1.05
LTN1-203ENST00000389195 ZNF816Q0VGE8 651 aaPredicted RBP8.48□□□□□ -1.05
LTN1-203ENST00000389195 IL15RAQ13261 267 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 SURF2Q15527 256 aaPredicted RBP8.48□□□□□ -1.05
LTN1-203ENST00000389195 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 H1FOOQ8IZA3 346 aaPredicted RBP8.48□□□□□ -1.05
LTN1-203ENST00000389195 ZNF462Q96JM2 2506 aa8.48□□□□□ -1.05
LTN1-203ENST00000389195 A0A1B0GV50 99 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 I3L521 148 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 GPR31O00270 319 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 SIAH2O43255 324 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 MMP23AO75900 390 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
LTN1-203ENST00000389195 IGKV1-39P01597 117 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 IGKV1D-39P04432 117 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 RRASP10301 218 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 C1orf229Q6ZS94 237 aaPredicted RBP8.47□□□□□ -1.05
LTN1-203ENST00000389195 SELENOHQ8IZQ5 122 aaKnown RBP8.47□□□□□ -1.05
LTN1-203ENST00000389195 KCNRGQ8N5I3 272 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 C18orf12Q96KH6 178 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 NSG2Q9Y328 171 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 TMEM210A6NLX4 147 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 KIAA1324LA8MWY0 1029 aaPredicted RBP8.47□□□□□ -1.05
LTN1-203ENST00000389195 TMPRSS2O15393 492 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 SSSCA1O60232 199 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
LTN1-203ENST00000389195 IFNA21P01568 189 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 ZNF134P52741 427 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 FGL1Q08830 312 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 SMIM21Q3B7S5 101 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 LPCAT3Q6P1A2 487 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 VKORC1L1Q8N0U8 176 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 DRAM1Q8N682 238 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 DNTTIP1Q9H147 329 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 PSG11Q9UQ72 335 aa8.47□□□□□ -1.05
LTN1-203ENST00000389195 ABCA1O95477 2261 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 FAM24AA6NFZ4 105 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 J3QW42 95 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 K7EPK0 472 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 ZNF737O75373 536 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 CST7O76096 145 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 TMEM50AO95807 157 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 KRASP01116 189 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 HEXAP06865 529 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 HKR1P10072 659 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 NFYBP25208 207 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 SRSF4Q08170 494 aaKnown RBP8.46□□□□□ -1.05
LTN1-203ENST00000389195 ZNF880Q6PDB4 577 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 Q8IYB0 196 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 OR4A4PQ8NGN8 299 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 ZCCHC14Q8WYQ9 949 aaKnown RBP8.46□□□□□ -1.05
LTN1-203ENST00000389195 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 SPEF1Q9Y4P9 236 aa8.46□□□□□ -1.05
LTN1-203ENST00000389195 LRRK2Q5S007 2527 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.46□□□□□ -1.06
LTN1-203ENST00000389195 SRRM5B3KS81 715 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 E7EQL1 145 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 SLC31A2O15432 143 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 FCN3O75636 299 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 SLC25A4P12235 298 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 FHITP49789 147 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 TMEM33P57088 247 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 CLINT1Q14677 625 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 NDUFA5Q16718 116 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 PRSS54Q6PEW0 395 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.46□□□□□ -1.06
LTN1-203ENST00000389195 SPERTQ8NA61 448 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 GALMQ96C23 342 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 BOD1Q96IK1 185 aa8.46□□□□□ -1.06
LTN1-203ENST00000389195 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms