RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 A0A1W2PQD3 144 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 A0A1W2PRD5 423 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR5K4A6NMS3 321 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR11H12B2RN74 326 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 C19orf84I3L1E1 186 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 J3QLI3 93 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR2T1O43869 369 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 KLRC4O43908 158 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 ZMPSTE24O75844 475 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR2F2O95006 317 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 UCHL1P09936 223 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR5AL1P0C617 328 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 UBCP0CG48 685 aaKnown RBP-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 RPL27AP46776 148 aaKnown RBP-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 SERPINB10P48595 397 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 HSPA13P48723 471 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 CLDN6P56747 220 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 C21orf59P57076 290 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 MLF1P58340 268 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 TSPEAR-AS2P59090 65 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 BPIFB3P59826 476 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 RAB2AP61019 212 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 ATP6V0D1P61421 351 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 RHOAP61586 193 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 PDK2Q15119 407 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 PDGFRLQ15198 375 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 MAPK14Q16539 360 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 HES3Q5TGS1 186 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 EBLN2Q6P2I7 272 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 CASC1Q6TDU7 716 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 CLEC20AQ6ZU45 233 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FAM19A3Q7Z5A8 133 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FAM228AQ86W67 206 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 SLC13A5Q86YT5 568 aaPredicted RBP-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 UMODL1-AS1Q8N2C9 162 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 EXOC3-AS1Q8N2X6 119 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 YIPF7Q8N8F6 280 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 GATD1Q8NB37 220 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 PROKR2Q8NFJ6 384 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR4P4Q8NGL7 312 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR9I1Q8NGQ6 314 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 OR11H2Q8NH07 326 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FNDC9Q8TBE3 224 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FAM81AQ8TBF8 368 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 ASB13Q8WXK3 278 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 NRGNQ92686 78 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 CCDC127Q96BQ5 260 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 CMTM5Q96DZ9 223 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 C9orf72Q96LT7 481 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 HBEGFQ99075 208 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 APOL4Q9BPW4 351 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 NUP58Q9BVL2 599 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 C1QTNF6Q9BXI9 259 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 PKIBQ9C010 78 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 DEFB129Q9H1M3 183 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 HAUS4Q9H6D7 363 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 MYEF2Q9P2K5 600 aaKnown RBP-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 SCML1Q9UN30 329 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FIS1Q9Y3D6 152 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 TBL2Q9Y4P3 447 aaKnown RBP-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 ALG5Q9Y673 324 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 GMEB1Q9Y692 573 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 FLT4P35916 1363 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 NINLQ9Y2I6 1382 aa-0.33□□□□□ -2.46
SNORD28-201ENST00000384706 LRP1Q07954 4544 aaKnown RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ABCB11O95342 1321 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SYNRGQ9UMZ2 1314 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ZDBF2Q9HCK1 2354 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TRAV14DV4A0A0A6YYC5 116 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CTAGE15A4D2H0 777 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 LINC00862A6NCI5 91 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 OR2AG2A6NM03 316 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TMEM212A6NML5 194 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 H7C2Y5 167 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ZNF701M0R085 212 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TXNDC9O14530 226 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ITGB1BP1O14713 200 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 FGF16O43320 207 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 HSBP1O75506 76 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 WBP4O75554 376 aaKnown RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TRAPPC6AO75865 159 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SPINK1P00995 79 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 IGHV1-69P01742 117 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 FBP1P09467 338 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 UBBP0CG47 229 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CCL3P10147 92 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SLC2A1P11166 492 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 DEFA4P12838 97 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 SPNP16150 400 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 NPPCP23582 126 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CD24P25063 80 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ATP6V0CP27449 155 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 PYCR1P32322 319 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ZNF93P35789 620 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 TAGLN2P37802 199 aaKnown RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 CCR2P41597 374 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 EFNA4P52798 201 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ATP5IP56385 69 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 GABARAPL2P60520 117 aa-0.34□□□□□ -2.46
SNORD28-201ENST00000384706 ACTR3P61158 418 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms