RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 GPX8Q8TED1 209 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 C15orf40Q8WUR7 153 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 SCPEP1Q9HB40 452 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 SOX21Q9Y651 276 aaPredicted RBP12.59□□□□□ -0.39
PDGFB-202ENST00000381551 NAV3Q8IVL0 2385 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 ODF3BA8MYP8 253 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 SULT1C2O00338 296 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 NPFFO15130 113 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 IGLV1-47P01700 117 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 SRD5A1P18405 259 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 HERPUD1Q15011 391 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 MORN2Q502X0 79 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 MIDNQ504T8 468 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 LY6G6FQ5SQ64 297 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 BCL6BQ8N143 479 aaPredicted RBP12.58□□□□□ -0.4
PDGFB-202ENST00000381551 OR4A4PQ8NGN8 299 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 OR9G1Q8NH87 305 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 IL1F10Q8WWZ1 152 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 AJUBAQ96IF1 538 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 MS4A7Q9GZW8 240 aaPredicted RBP12.58□□□□□ -0.4
PDGFB-202ENST00000381551 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.4
PDGFB-202ENST00000381551 JPT1Q9UK76 154 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.4
PDGFB-202ENST00000381551 SETD2Q9BYW2 2564 aaPredicted RBP12.57□□□□□ -0.4
PDGFB-202ENST00000381551 MEIS3P1A6NDR6 274 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 J3QR06 171 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 TOR1AO14656 332 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 YPEL1O60688 119 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 ARG1P05089 322 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 LPLP06858 475 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 ZNF134P52741 427 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 PRRX1P54821 245 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 Q3ZCU0 254 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 STEAP3Q658P3 488 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 PYHIN1Q6K0P9 492 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 CCDC190Q86UF4 302 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 BEND2Q8NDZ0 799 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 ZNF596Q8TC21 504 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 C22orf15Q8WYQ4 148 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 YPEL2Q96QA6 119 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
PDGFB-202ENST00000381551 NIPBLQ6KC79 2804 aaeCLIP12.57□□□□□ -0.4
PDGFB-202ENST00000381551 TRBV6-7A0A0A0MS04 114 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 DIRAS3O95661 229 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 FCER2P06734 321 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 FAM157CP0CG43 387 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 NAT1P18440 290 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 EPHA1P21709 976 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 ZBTB25P24278 435 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 SAA4P35542 130 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 PPP1CCP36873 323 aaKnown RBP12.56□□□□□ -0.4
PDGFB-202ENST00000381551 CEACAM6P40199 344 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 ETV6P41212 452 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 LGALS4P56470 323 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 IL18Q14116 193 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 GNMTQ14749 295 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 LDLRAD2Q5SZI1 272 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 LYSMD2Q8IV50 215 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 ZNF439Q8NDP4 499 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 OR4P4Q8NGL7 312 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 OR1A1Q9P1Q5 309 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 SLC23A1Q9UHI7 598 aa12.56□□□□□ -0.4
PDGFB-202ENST00000381551 A0A0U1RQK1 487 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 GABARAPH6UMI1 98 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 CTDSPLO15194 276 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 RGS11O94810 467 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 GNG10P50151 68 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 FAM131AQ6UXB0 335 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 CABLES2Q9BTV7 478 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 MMP28Q9H239 520 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 IFT46Q9NQC8 304 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 ZNRD1Q9P1U0 126 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 KLK11Q9UBX7 282 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
PDGFB-202ENST00000381551 V9GYH0 126 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 NF1P21359 2839 aa12.55□□□□□ -0.4
PDGFB-202ENST00000381551 ZFHX3Q15911 3703 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms