RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 NRASP01111 189 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 UMODP07911 640 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IRF2P14316 349 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 UCP3P55916 312 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 ARSJQ5FYB0 599 aaPredicted RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 UBALD2Q8IYN6 164 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IFI44Q8TCB0 444 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 A0A1B0GW64 132 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 RRP8O43159 456 aaKnown RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 TDRG1Q3Y452 100 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 WDR5BQ86VZ2 330 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TM2D1Q9BX74 207 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 DEFB126Q9BYW3 111 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 LOC400499M0QZD8 3231 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TRBV24-1A0A075B6N3 115 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IGKV1-12A0A0C4DH73 117 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 PGPEP1LA6NFU8 196 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 MARCH11A6NNE9 402 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 HS3ST1O14792 307 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 IGKV1D-12P01611 117 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 GNG10P50151 68 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TDGF1P3P51864 188 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 CARD18P57730 90 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IL11RAQ14626 422 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TCF23Q7RTU1 214 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 TMPRSS7Q7RTY8 843 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 VN1R17PQ8TDU5 208 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 ADGRG7Q96K78 797 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 IMMP1LQ96LU5 166 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 PRDM6Q9NQX0 595 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 C19orf25Q9UFG5 118 aaPredicted RBP11.87□□□□□ -0.51
SDC1-202ENST00000381150 NAT8Q9UHE5 227 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 PPP1R3CQ9UQK1 317 aa11.87□□□□□ -0.51
SDC1-202ENST00000381150 CD300LBA8K4G0 201 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 ZNF732B4DXR9 585 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 ZXDAP98168 799 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 PEAR1Q5VY43 1037 aaPredicted RBP11.86□□□□□ -0.51
SDC1-202ENST00000381150 SLC25A47Q6Q0C1 308 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 CRIP3Q6Q6R5 217 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 H1FOOQ8IZA3 346 aaPredicted RBP11.86□□□□□ -0.51
SDC1-202ENST00000381150 EXTL1Q92935 676 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 DIRC2Q96SL1 478 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 ZFHX4Q86UP3 3567 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 IGHV1-45A0A0A0MS14 117 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 A0A0G2JRQ6 117 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 HPRT1P00492 218 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 SELEP16581 610 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 ETFRF1Q6IPR1 90 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 OR6X1Q8NH79 312 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 MRPL30Q8TCC3 161 aaKnown RBP11.86□□□□□ -0.51
SDC1-202ENST00000381150 RDH5Q92781 318 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 OR51B6Q9H340 312 aa11.86□□□□□ -0.51
SDC1-202ENST00000381150 LOC102725191A0A1B0GVB3 256 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 DLEU1O43261 78 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 CLDN1O95832 211 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 B4GALT1P15291 398 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 VDAC1P21796 283 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 PSMB3P49720 205 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 TRA2AQ13595 282 aaKnown RBP eCLIP11.85□□□□□ -0.51
SDC1-202ENST00000381150 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 SAMD10Q9BYL1 202 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 PARLQ9H300 379 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 IL36RNQ9UBH0 155 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 SPINK4O60575 86 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 PSG2P11465 335 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 MDH2P40926 338 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 CNN3Q15417 329 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 SPINK9Q5DT21 86 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 ZDHHC23Q8IYP9 409 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 MAML2Q8IZL2 1156 aaPredicted RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 BEND2Q8NDZ0 799 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 CISD1Q9NZ45 108 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 POLR3KQ9Y2Y1 108 aaPredicted RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 R4GN57 208 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 V9GYS6 101 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms