RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 RPS2P15880 293 aaKnown RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 HOXC12P31275 282 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 GNG3P63215 75 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 POC1AQ8NBT0 407 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 EXTL1Q92935 676 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 TOMM40LQ969M1 308 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 RARRES2Q99969 163 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 RAB18Q9NP72 206 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 CYB5BO43169 146 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 RHBDL1O75783 438 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 TNFSF13O75888 250 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 COX5AP20674 150 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 RPL12P30050 165 aaKnown RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 IL2RGP31785 369 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 FCGR2CP31995 323 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 PPP1CCP36873 323 aaKnown RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 TMEM33P57088 247 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ESPL1Q14674 2120 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ELOBQ15370 118 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 Q6ZS92 163 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 C5orf24Q7Z6I8 188 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 SLC35B3Q9H1N7 401 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 ZNF286AQ9HBT8 521 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
CLCN4-201ENST00000380829 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
CLCN4-201ENST00000380829 OR5B21A6NL26 309 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
CLCN4-201ENST00000380829 PTGER4P35408 488 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 CAMLGP49069 296 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 FXYD4P59646 89 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 ZNF573Q86YE8 665 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 RBMXL3Q8N7X1 1067 aaKnown RBP12.12□□□□□ -0.47
CLCN4-201ENST00000380829 SH3BGRL3Q9H299 93 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 BSNQ9UPA5 3926 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 K7EPK0 472 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 TAAR5O14804 337 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-201ENST00000380829 WDR1O75083 606 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 UCP2P55851 309 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 RPRMLQ8N4K4 120 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 FAM71E2Q8N5Q1 922 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 STARD4Q96DR4 205 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 C2orf50Q96LR7 162 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 CNTNAP3Q9BZ76 1288 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 PLSCR4Q9NRQ2 329 aa12.12□□□□□ -0.47
CLCN4-201ENST00000380829 RCL1Q9Y2P8 373 aaKnown RBP12.12□□□□□ -0.47
CLCN4-201ENST00000380829 A8MWP6 167 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 PET100P0DJ07 73 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 PAX1P15863 534 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 PCP4P48539 62 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 RAB4BP61018 213 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FOXC1Q12948 553 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 TMEM211Q6ICI0 200 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 WDR86Q86TI4 376 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 NEK7Q8TDX7 302 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 OR51I2Q9H344 312 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A10PA6NDY2 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A18PA6NE21 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A16PA6NEW6 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A20PA6NIJ5 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A8PA6NJQ4 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A22PA8MWA6 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 PRH1P02810 166 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
CLCN4-201ENST00000380829 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
CLCN4-201ENST00000380829 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
CLCN4-201ENST00000380829 H0YL77 283 aa12.1□□□□□ -0.47
CLCN4-201ENST00000380829 J3QW42 95 aa12.1□□□□□ -0.47
CLCN4-201ENST00000380829 JTBO76095 146 aa12.1□□□□□ -0.47
CLCN4-201ENST00000380829 SCGB1D2O95969 90 aa12.1□□□□□ -0.47
CLCN4-201ENST00000380829 TRGC1P0CF51 173 aa12.1□□□□□ -0.47
CLCN4-201ENST00000380829 SELEP16581 610 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms