RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 ZNF415Q09FC8 603 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 BSXQ3C1V8 233 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 C1orf185Q5T7R7 199 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 CEACAM18A8MTB9 384 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 TMPRSS3P57727 454 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 HIST1H1AQ02539 215 aaPredicted RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 NKG7Q16617 165 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 MRGPRX3Q96LB0 322 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 SYNGR1O43759 233 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 FXYD3Q14802 87 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ZNF826PQ6ZT77 177 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 A6NJY4 79 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 INHBBP09529 407 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 SRD5A2P31213 254 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 STARD6P59095 220 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ISL1P61371 349 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ARID1AO14497 2285 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 M0R143 59 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 WNT9BO14905 357 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.673e-6■■■■□ 21.5
CHD3-203ENST00000380358 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ATOH7Q8N100 152 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 ADAD2Q8NCV1 583 aaKnown RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 OR1L8Q8NGR8 309 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 FLRT3Q9NZU0 649 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 TUBD1Q9UJT1 453 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 LINC01387J3KSC0 135 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 HRKO00198 91 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 PDE6DO43924 150 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 TGIF1Q15583 401 aa10.87□□□□□ -0.67
CHD3-203ENST00000380358 RCC2Q9P258 522 aaKnown RBP10.87□□□□□ -0.67
CHD3-203ENST00000380358 STARD10Q9Y365 291 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 IGLV3-10A0A075B6K4 115 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 SUMO3P55854 103 aaPredicted RBP10.86□□□□□ -0.67
CHD3-203ENST00000380358 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD3-203ENST00000380358 COTL1Q14019 142 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 STPG1Q5TH74 334 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 ANKRD33Q7Z3H0 272 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 NT5CQ8TCD5 201 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 LILRA5A6NI73 299 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 ISLRO14498 428 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 PRICKLE4Q2TBC4 344 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 RNASEH2CQ8TDP1 164 aaKnown RBP10.86□□□□□ -0.67
CHD3-203ENST00000380358 RASL10BQ96S79 203 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 PIPOXQ9P0Z9 390 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 IGHV5-10-1A0A0J9YXX1 117 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
CHD3-203ENST00000380358 PCMT1P22061 227 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 SELENOTP62341 195 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 HLA-DRB3P79483 266 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 ST6GALNAC3Q8NDV1 305 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 C1orf162Q8NEQ5 155 aaPredicted RBP10.86□□□□□ -0.67
CHD3-203ENST00000380358 ASB5Q8WWX0 329 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 ANOS1P23352 680 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 MFAP2P55001 183 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 RIPPLY3P57055 190 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 KLF9Q13886 244 aaPredicted RBP10.86□□□□□ -0.67
CHD3-203ENST00000380358 TMEM177Q53S58 311 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 DUX3Q96PT4 197 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 A0A087X0M5 115 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 A0A1B0GX30 115 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 CDS2O95674 445 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 SCMH1Q96GD3 660 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 HSPB7Q9UBY9 170 aa10.86□□□□□ -0.67
CHD3-203ENST00000380358 TRAV21A0A0B4J279 112 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 NKX2-6A6NCS4 301 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 ASB10Q8WXI3 467 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 CYB5R1Q9UHQ9 305 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 NUP214P35658 2090 aaPredicted RBP10.85□□□□□ -0.67
CHD3-203ENST00000380358 HKR1P10072 659 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 EFNB2P52799 333 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 TP53I13Q8NBR0 393 aaPredicted RBP10.85□□□□□ -0.67
CHD3-203ENST00000380358 OR6X1Q8NH79 312 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 DNASE2BQ8WZ79 361 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 CTAG2O75638 210 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 PRDX2P32119 198 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
CHD3-203ENST00000380358 MAP1BP46821 2468 aaKnown RBP10.85□□□□□ -0.67
CHD3-203ENST00000380358 ZFPL1O95159 310 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 AMY1AP04745 511 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 CTSDP07339 412 aaPredicted RBP10.85□□□□□ -0.67
CHD3-203ENST00000380358 TEX30Q5JUR7 227 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 CCDC144NLQ6NUI1 221 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
CHD3-203ENST00000380358 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms