RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SPINK4O60575 86 aa9.8□□□□□ -0.84
SMAD9-202ENST00000379826 PKIAP61925 76 aa9.8□□□□□ -0.84
SMAD9-202ENST00000379826 ACOT6Q3I5F7 207 aaPredicted RBP9.8□□□□□ -0.84
SMAD9-202ENST00000379826 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
SMAD9-202ENST00000379826 LHFPL1Q86WI0 220 aa9.8□□□□□ -0.84
SMAD9-202ENST00000379826 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
SMAD9-202ENST00000379826 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
SMAD9-202ENST00000379826 MT-CO2P00403 227 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 OPN1MWP04001 364 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 HSPB1P04792 205 aaKnown RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 OPN1MW2P0DN77 364 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 OPN1MW3P0DN78 364 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 CFPP27918 469 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PRAMEF5Q5TYX0 476 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 OR1A1Q9P1Q5 309 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 VAX2Q9UIW0 290 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 ZNF391Q9UJN7 358 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 ZDHHC8Q9ULC8 765 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 RPH3ALQ9UNE2 315 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 OR2W1Q9Y3N9 320 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 NPIPB13A6NJU9 1138 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 NPIPB4C9JG80 1138 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 MDH2P40926 338 aaKnown RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 RFESDQ8TAC1 157 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 CT55Q8WUE5 264 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 CLN8Q9UBY8 286 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PAX6P26367 422 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 SRD5A2P31213 254 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PMELP40967 661 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 KHDC3LQ587J8 217 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 FAM87AP0C7U9 286 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 GFI1BQ5VTD9 330 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 CALHM1Q8IU99 346 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 GALMQ96C23 342 aa9.79□□□□□ -0.84
SMAD9-202ENST00000379826 SF3B5Q9BWJ5 86 aaKnown RBP9.79□□□□□ -0.84
SMAD9-202ENST00000379826 PAGE4O60829 102 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 FOLR2P14207 255 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 RAB31Q13636 194 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 GAMTQ14353 236 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 OR1C1Q15619 314 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 FAM89BQ8N5H3 189 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 IL22RA2Q969J5 263 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 UHRF2Q96PU4 802 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 MSL2Q9HCI7 577 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 CHCHD2Q9Y6H1 151 aaPredicted RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 SLC22A20A6NK97 555 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 B4DEV8 164 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 CYB5R3P00387 301 aaPredicted RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 SRP19P09132 144 aaKnown RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 GLIPR1P48060 266 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 PPP1CBP62140 327 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 GNG3P63215 75 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 FOXO1Q12778 655 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 SSPNQ14714 243 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 NFAM1Q8NET5 270 aaPredicted RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 TMEM171Q8WVE6 324 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 ZDHHC11Q9H8X9 412 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 PMS2P1A4D2B8 440 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 FAM131CQ96AQ9 280 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 FBLN5Q9UBX5 448 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 CDX4O14627 284 aaPredicted RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 CXCL1P09341 107 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 SUCLG1P53597 346 aaKnown RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 M1APQ8TC57 530 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 WNT5BQ9H1J7 359 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 MPDZO75970 2070 aa9.78□□□□□ -0.84
SMAD9-202ENST00000379826 URB1O60287 2271 aaKnown RBP9.78□□□□□ -0.84
SMAD9-202ENST00000379826 IGKV1-27A0A075B6S5 117 aa9.77□□□□□ -0.84
SMAD9-202ENST00000379826 ACTL6BO94805 426 aa9.77□□□□□ -0.84
SMAD9-202ENST00000379826 NGFP01138 241 aa9.77□□□□□ -0.84
SMAD9-202ENST00000379826 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.84
SMAD9-202ENST00000379826 CCL1P22362 96 aa9.77□□□□□ -0.84
SMAD9-202ENST00000379826 ANGPTL4Q9BY76 406 aa9.77□□□□□ -0.84
SMAD9-202ENST00000379826 C21orf140B9A014 251 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 NDUFS6O75380 124 aaKnown RBP9.77□□□□□ -0.85
SMAD9-202ENST00000379826 MBP02144 154 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 GPR12P47775 334 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 OR3A1P47881 315 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 TAAR3PQ9P1P4 343 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 A0A0G2JMM0 328 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 A0A1W2PPB8 328 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 A0A1W2PRS3 328 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 KIR3DP1A8MWS1 328 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 TOX3O15405 576 aaPredicted RBP9.77□□□□□ -0.85
SMAD9-202ENST00000379826 SYNGR3O43761 229 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 GYPAP02724 150 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 RNF224P0DH78 156 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 C10orf128Q5T292 105 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 ZNF468Q5VIY5 522 aaPredicted RBP9.77□□□□□ -0.85
SMAD9-202ENST00000379826 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
SMAD9-202ENST00000379826 DUSP13Q9UII6 198 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms