RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF736B4DX44 427 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 WIPF1O43516 503 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 IGKV1D-33P01593 117 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 IGKV1-33P01594 117 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 CSF1P09603 554 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 ARSBP15848 533 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 RAB7AP51149 207 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 TMEM50BP56557 158 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 OR10A3P58181 314 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 GABARAPL2P60520 117 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 ARSJQ5FYB0 599 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 SLC25A48Q6ZT89 311 aaKnown RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 MOB3BQ86TA1 216 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 DTX3Q8N9I9 347 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 RTN4IP1Q8WWV3 396 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 NEDD4LQ96PU5 975 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 NDUFB11Q9NX14 153 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
RAB4B-202ENST00000378307 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
RAB4B-202ENST00000378307 LDLRAD4O15165 306 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 FBXO24O75426 580 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 NAPSAO96009 420 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 GAPDHP04406 335 aaKnown RBP12.22□□□□□ -0.45
RAB4B-202ENST00000378307 TMEM11P17152 192 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 EBI3Q14213 229 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 HES1Q14469 280 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 RAB11BQ15907 218 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 C2orf76Q3KRA6 126 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 Q3ZCU0 254 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 MORN2Q502X0 79 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 TCTEX1D4Q5JR98 221 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 HES5Q5TA89 166 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 UBE2UQ5VVX9 321 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 AKR1E2Q96JD6 320 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
RAB4B-202ENST00000378307 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 V9GY05 133 aa12.22□□□□□ -0.45
RAB4B-202ENST00000378307 H3BUI4 141 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.45
RAB4B-202ENST00000378307 HMGN3Q15651 99 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 NSUN5P1Q3KNT7 163 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF880Q6PDB4 577 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 TRAT1Q6PIZ9 186 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 OR2W3Q7Z3T1 314 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 ODF3L1Q8IXM7 274 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 SVOPQ8N4V2 548 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 EAF1Q96JC9 268 aaPredicted RBP12.21□□□□□ -0.45
RAB4B-202ENST00000378307 PLEKHJ1Q9NW61 149 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 AK3Q9UIJ7 227 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 MOB4Q9Y3A3 225 aa12.21□□□□□ -0.45
RAB4B-202ENST00000378307 A0A0B4J203 849 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 TRAV1-2A0A0B4J238 106 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 TMEM272A0A1B0GTI8 110 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 MRPS14O60783 128 aaKnown RBP12.2□□□□□ -0.46
RAB4B-202ENST00000378307 PEX14O75381 377 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 VEGFCP49767 419 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF137PP52743 207 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 DEFA6Q01524 100 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 Q8N6K4 173 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 PLSCR3Q9NRY6 295 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 KCNIP1Q9NZI2 227 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 LRRC42Q9Y546 428 aa12.2□□□□□ -0.46
RAB4B-202ENST00000378307 LINC01548A6NM66 108 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 HTD2P86397 168 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 CD83Q01151 205 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 MOGAT2Q3SYC2 334 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 C22orf42Q6IC83 251 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF554Q86TJ5 538 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 IZUMO1Q8IYV9 350 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
RAB4B-202ENST00000378307 PECRQ9BY49 303 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 PARP12Q9H0J9 701 aaKnown RBP12.19□□□□□ -0.46
RAB4B-202ENST00000378307 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 STEAP1Q9UHE8 339 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
RAB4B-202ENST00000378307 RRP15Q9Y3B9 282 aaKnown RBP12.19□□□□□ -0.46
RAB4B-202ENST00000378307 SMIM30A4D0T7 59 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 M0QZK8 103 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 YPEL1O60688 119 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 IL3RAP26951 378 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 PSMB9P28065 219 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms