RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 Q0VFX4 171 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 OR8G1Q15617 311 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 ADIRFQ15847 76 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 CEACAM21Q3KPI0 293 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 SPANXN5Q5MJ07 72 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 ZDHHC23Q8IYP9 409 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 OR10G4Q8NGN3 311 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 TECTBQ96PL2 329 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 HIPK2Q9H2X6 1198 aa15.31■□□□□ 0.04
GNE-201ENST00000377902 A0A087X0M5 115 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 A0A1B0GX30 115 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 SYNGR2O43760 224 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 IGKV1D-33P01593 117 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 IGKV1-33P01594 117 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 MRPL21Q7Z2W9 205 aaKnown RBP15.3■□□□□ 0.04
GNE-201ENST00000377902 MKXQ8IYA7 352 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 DUSP23Q9BVJ7 150 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 RHBDL1O75783 438 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 MDH2P40926 338 aaKnown RBP15.3■□□□□ 0.04
GNE-201ENST00000377902 RTP5Q14D33 572 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 RNPS1Q15287 305 aaKnown RBP15.3■□□□□ 0.04
GNE-201ENST00000377902 RIPPLY2Q5TAB7 128 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 SSX9Q7RTT3 188 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 IFI44Q8TCB0 444 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 PSMF1Q92530 271 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 OR4C12Q96R67 309 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 RAB40CQ96S21 281 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 GAB2Q9UQC2 676 aa15.3■□□□□ 0.04
GNE-201ENST00000377902 IGHV3-64DA0A0J9YX35 117 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A10PA6NDY2 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A18PA6NE21 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A16PA6NEW6 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A20PA6NIJ5 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A8PA6NJQ4 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A7PA6NKC0 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A22PA8MWA6 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A12PA8MX19 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A5PA8MXJ8 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A23PA8MXZ1 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A15PP0C7V4 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A13PP0C7W8 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A14PP0C7W9 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 FAM90A24PP0C7X0 464 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 ERVS71-1P61550 626 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 LILRB2Q8N423 598 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 GATAD1Q8WUU5 269 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 IL22RA2Q969J5 263 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 MAP1LC3B2A6NCE7 125 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 DNPH1O43598 174 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 NDUFB7P17568 137 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 GZMHP20718 246 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 GDF1P27539 372 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 COL10A1Q03692 680 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 PNRC1Q12796 327 aaPredicted RBP15.29■□□□□ 0.04
GNE-201ENST00000377902 COL19A1Q14993 1142 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 SRSF7Q16629 238 aaKnown RBP eCLIP15.29■□□□□ 0.04
GNE-201ENST00000377902 C16orf82Q7Z2V1 217 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 KCNE4Q8WWG9 221 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 MBD3L1Q8WWY6 194 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 RPUSD4Q96CM3 377 aaKnown RBP15.29■□□□□ 0.04
GNE-201ENST00000377902 MAP1LC3BQ9GZQ8 125 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
GNE-201ENST00000377902 UBE2L5PA0A1B0GUS4 154 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 SMCO3A2RU48 225 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 K7ESF4 209 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 ZNF737O75373 536 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 CD81P60033 236 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 RPS16P62249 146 aaKnown RBP15.28■□□□□ 0.04
GNE-201ENST00000377902 OR8G2PQ6IF36 304 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 OR2Y1Q8NGV0 311 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 GTF3AQ92664 365 aaKnown RBP15.28■□□□□ 0.04
GNE-201ENST00000377902 SGCZQ96LD1 299 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 ELOVL1Q9BW60 279 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 CDH20Q9HBT6 801 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 VAX2Q9UIW0 290 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 TRBV24-1A0A075B6N3 115 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 CD300LBA8K4G0 201 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 MRPL33O75394 65 aaKnown RBP15.28■□□□□ 0.04
GNE-201ENST00000377902 CTXN2P0C2S0 81 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 OTX2P32243 289 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 PKIAP61925 76 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 P2RY6Q15077 328 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 TESK1Q15569 626 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 PRSS8Q16651 343 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 LRRC75BQ2VPJ9 315 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 ZNF585BQ52M93 769 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 SPEM1Q8N4L4 309 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 RPP25LQ8N5L8 163 aaKnown RBP15.28■□□□□ 0.04
GNE-201ENST00000377902 SMIM7Q9BQ49 75 aa15.28■□□□□ 0.04
GNE-201ENST00000377902 MRPS17Q9Y2R5 130 aaKnown RBP15.28■□□□□ 0.04
GNE-201ENST00000377902 C9J4A7 227 aa15.27■□□□□ 0.04
GNE-201ENST00000377902 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.04
GNE-201ENST00000377902 DEFA4P12838 97 aa15.27■□□□□ 0.04
GNE-201ENST00000377902 OR10A7Q8NGE5 316 aa15.27■□□□□ 0.04
GNE-201ENST00000377902 OR10V1Q8NGI7 309 aa15.27■□□□□ 0.04
GNE-201ENST00000377902 DOCK11Q5JSL3 2073 aa15.27■□□□□ 0.04
GNE-201ENST00000377902 CYTIPO60759 359 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 WDR1O75083 606 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 AMBPP02760 352 aa15.27■□□□□ 0.03
GNE-201ENST00000377902 IL11RAQ14626 422 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms