RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LOXL2Q9Y4K0 774 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 A0A1B0GV90 55 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 VENTXO95231 258 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 HAND1O96004 215 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 MYF5P13349 255 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 AMTP48728 403 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 PTTG1IPP53801 180 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 PTCRAQ6ISU1 281 aaPredicted RBP7.59□□□□□ -1.19
PCDH9-202ENST00000377865 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
PCDH9-202ENST00000377865 TGIF2LYQ8IUE0 185 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 OR4B1Q8NGF8 309 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 RSG1Q9BU20 258 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 PLXNA2O75051 1894 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 TRGV10A0A0A0MS01 117 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 IGSF23A1L1A6 192 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 H0Y8G0 127 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 H0YIZ8 118 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 TGFBR3LH3BV60 316 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 ENSAO43768 121 aaKnown RBP7.59□□□□□ -1.19
PCDH9-202ENST00000377865 FHITP49789 147 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 SPATA46Q5T0L3 261 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 OR4S2Q8NH73 311 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 SRSF10O75494 262 aaKnown RBP7.59□□□□□ -1.19
PCDH9-202ENST00000377865 AGAP20933 346 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 USF1P22415 310 aaPredicted RBP7.59□□□□□ -1.19
PCDH9-202ENST00000377865 STARD6P59095 220 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 GAB4Q2WGN9 574 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 UCN2Q96RP3 112 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 PCGF1Q9BSM1 259 aa7.59□□□□□ -1.19
PCDH9-202ENST00000377865 IGKV3D-11A0A0A0MRZ8 115 aa7.59□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM250H0YL14 139 aa7.59□□□□□ -1.2
PCDH9-202ENST00000377865 EPHA8P29322 1005 aaPredicted RBP7.59□□□□□ -1.2
PCDH9-202ENST00000377865 SSPNQ14714 243 aa7.59□□□□□ -1.2
PCDH9-202ENST00000377865 CLDND2Q8NHS1 167 aa7.59□□□□□ -1.2
PCDH9-202ENST00000377865 FRMPD3Q5JV73 1810 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 TRBV9A0A0B4J1U6 114 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 OR5G3P0C626 314 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 CT45A10P0DMU9 189 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 PSG4Q00888 419 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 GABRA6Q16445 453 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 DNLZQ5SXM8 178 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 ETFRF1Q6IPR1 90 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF645Q8N7E2 425 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 PROCRQ9UNN8 238 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 GOLT1BQ9Y3E0 138 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 FAM89BQ8N5H3 189 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 DEFB127Q9H1M4 99 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 MST1P26927 711 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 RPS16P62249 146 aaKnown RBP7.58□□□□□ -1.2
PCDH9-202ENST00000377865 OR1C1Q15619 314 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 SNAI3Q3KNW1 292 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 TRIM61Q5EBN2 209 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 SLC25A53Q5H9E4 307 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 NFAM1Q8NET5 270 aaPredicted RBP7.58□□□□□ -1.2
PCDH9-202ENST00000377865 TMEM56Q96MV1 263 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 RBKSQ9H477 322 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 DECR2Q9NUI1 292 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 CASP8AP2Q9UKL3 1982 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 CCL3P10147 92 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 BRS3P32247 399 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 G6PCP35575 357 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 CSN1S1P47710 185 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 VHLLQ6RSH7 139 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 HEPN1Q6WQI6 88 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF596Q8TC21 504 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 Q8WTZ3 238 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 STARD4Q96DR4 205 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 PRDM14Q9GZV8 571 aa7.58□□□□□ -1.2
PCDH9-202ENST00000377865 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
PCDH9-202ENST00000377865 M0R2Z0 102 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 CTSBP07858 339 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SCTP09683 121 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 LCN2P80188 198 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 PAX5Q02548 391 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 C9orf50Q5SZB4 431 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SFTPA2Q8IWL1 248 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 PAQR4Q8N4S7 273 aaPredicted RBP7.57□□□□□ -1.2
PCDH9-202ENST00000377865 OR2Y1Q8NGV0 311 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 LRFN3Q9BTN0 628 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 PKIBQ9C010 78 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 IL17BQ9UHF5 180 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 A0A087WV48 116 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF253O75346 499 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SP1P08047 785 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 GAMTQ14353 236 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 TGIF1Q15583 401 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 ZNF818PQ6ZRF7 136 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 WDR61Q9GZS3 305 aaKnown RBP7.57□□□□□ -1.2
PCDH9-202ENST00000377865 PLXNA4Q9HCM2 1894 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 GLRX2Q9NS18 164 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 J3QR89 54 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 RAB29O14966 203 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 SPCS3P61009 180 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 LRTM2Q8N967 370 aa7.57□□□□□ -1.2
PCDH9-202ENST00000377865 DYNLRB1Q9NP97 96 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms