RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 ZNF665Q9H7R5 613 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 TRAPPC2LQ9UL33 140 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 TRBV23-1A0A0A0MS06 115 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 IGKV1-39P01597 117 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 IGKV1D-39P04432 117 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 ERVFRD-1P60508 538 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 ARL16Q0P5N6 197 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 SAXO1Q8IYX7 474 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 OR10V1Q8NGI7 309 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 CLDND2Q8NHS1 167 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 LINC00470Q9BZP3 86 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 RPRMQ9NS64 109 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 RNF150Q9ULK6 438 aa15.4■□□□□ 0.06
SF1-203ENST00000377387 C9orf172C9J069 976 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 GNG3P63215 75 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 HLA-DRB3P79483 266 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 BAXQ07812 192 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 CLN3Q13286 438 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 FAM53AQ6NSI3 398 aaPredicted RBP15.39■□□□□ 0.05
SF1-203ENST00000377387 ZNF251Q9BRH9 671 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 MT-CO3P00414 261 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 EIF2S3P41091 472 aaKnown RBP15.39■□□□□ 0.05
SF1-203ENST00000377387 ELLP55199 621 aaPredicted RBP15.39■□□□□ 0.05
SF1-203ENST00000377387 RPS16P62249 146 aaKnown RBP15.39■□□□□ 0.05
SF1-203ENST00000377387 IL24Q13007 206 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 SPANXN5Q5MJ07 72 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 ZNF573Q86YE8 665 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 SCGB1C1Q8TD33 95 aa15.39■□□□□ 0.05
SF1-203ENST00000377387 MRPS18CQ9Y3D5 142 aaKnown RBP15.39■□□□□ 0.05
SF1-203ENST00000377387 HMGB3O15347 200 aaKnown RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 CEBPDP49716 269 aaPredicted RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 ERVS71-1P61550 626 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 UNKLQ9H9P5 680 aaKnown RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 SEBOXQ9HB31 216 aaPredicted RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 PSENENQ9NZ42 101 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 OR14J1Q9UGF5 321 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 A0A1B0GW64 132 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 CLEC18AA5D8T8 446 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 CYB5BO43169 146 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 ARR3P36575 388 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 S100A12P80511 92 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 H1FOOQ8IZA3 346 aaPredicted RBP15.38■□□□□ 0.05
SF1-203ENST00000377387 CLEC18CQ8NCF0 446 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 TVP23CQ96ET8 276 aa15.38■□□□□ 0.05
SF1-203ENST00000377387 CELA3BP08861 270 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 RAB2AP61019 212 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 ELOBQ15370 118 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 NRN1LQ496H8 165 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 MDP1Q86V88 176 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 ALKBH6Q3KRA9 238 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 OR8G2PQ6IF36 304 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 SSX7Q7RTT5 188 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 PLK3Q9H4B4 646 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 A0A1W2PNU3 283 aaPredicted RBP15.37■□□□□ 0.05
SF1-203ENST00000377387 BTBD17A6NE02 478 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 CDIPTO14735 213 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 SYNGR2O43760 224 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 IGKV1-5P01602 117 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 GRPP07492 148 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 MDKP21741 143 aaPredicted RBP15.37■□□□□ 0.05
SF1-203ENST00000377387 HOXA6P31267 233 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 ZNF506Q5JVG8 444 aa15.37■□□□□ 0.05
SF1-203ENST00000377387 CXorf67Q86X51 503 aaPredicted RBP15.37■□□□□ 0.05
SF1-203ENST00000377387 DUXBA0A1W2PPF3 345 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 DFFBO76075 338 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 TFF1P04155 84 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 CEACAM6P40199 344 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 C4orf17Q53FE4 359 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 ZNF787Q6DD87 383 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 YPEL4Q96NS1 127 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 IL17BQ9UHF5 180 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 A0A1B0GU03 582 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 KIAA1324LA8MWY0 1029 aaPredicted RBP15.36■□□□□ 0.05
SF1-203ENST00000377387 OR2H2O95918 312 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 HSPB1P04792 205 aaKnown RBP15.36■□□□□ 0.05
SF1-203ENST00000377387 TESK1Q15569 626 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 SRSF7Q16629 238 aaKnown RBP eCLIP15.36■□□□□ 0.056e-7■□□□□ 8.9
SF1-203ENST00000377387 BEND4Q6ZU67 534 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 RIMS4Q9H426 269 aaPredicted RBP15.36■□□□□ 0.05
SF1-203ENST00000377387 DOK5Q9P104 306 aa15.36■□□□□ 0.05
SF1-203ENST00000377387 RP1L1Q8IWN7 2480 aaPredicted RBP15.35■□□□□ 0.05
SF1-203ENST00000377387 IL18BPO95998 194 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 IGLV2-14P01704 120 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 CD200P41217 278 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 DCAF10Q5QP82 559 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 SNIP1Q8TAD8 396 aaKnown RBP15.35■□□□□ 0.05
SF1-203ENST00000377387 MALSU1Q96EH3 234 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 ABHD14BQ96IU4 210 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 STRADBQ9C0K7 418 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 SMDT1Q9H4I9 107 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 TRGC2P03986 189 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 MEOX1P50221 254 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 ATP1A1-AS1Q5TC04 95 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 SPNS3Q6ZMD2 512 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 OR2J1Q9GZK6 312 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 OR51I2Q9H344 312 aa15.35■□□□□ 0.05
SF1-203ENST00000377387 CACNA1GO43497 2377 aa15.34■□□□□ 0.05
SF1-203ENST00000377387 HBE1P02100 147 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms