RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 GALMQ96C23 342 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 GPR22Q99680 433 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 EBNA1BP2Q99848 306 aaKnown RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 UGT2B28Q9BY64 529 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 MRPL16Q9NX20 251 aaKnown RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 PLXNB1O43157 2135 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 MYO5BQ9ULV0 1848 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 BAHCC1Q9P281 2608 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CEP170Q5SW79 1584 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 IGHV3OR15-7A0A075B7D8 119 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 TMEM213A2RRL7 107 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 F5H5T6 163 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 KLRC4-KLRK1H3BQV0 150 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 GOLGA8RI6L899 631 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 M0QYV0 167 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 TOX3O15405 576 aaPredicted RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 SLC25A20O43772 301 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CDS2O95674 445 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CTSEP14091 401 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 ORM2P19652 201 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 F8A1P23610 371 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 PSMB6P28072 239 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 COILP38432 576 aaPredicted RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CRATP43155 626 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 OR8G1Q15617 311 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 KRTAP6-3Q3LI67 103 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 PYCR3Q53H96 274 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 PDPK2PQ6A1A2 396 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CLEC6AQ6EIG7 209 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 SMARCD3Q6STE5 483 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 FUNDC1Q8IVP5 155 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 LFNGQ8NES3 379 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 MFSD8Q8NHS3 518 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 SUN5Q8TC36 379 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 TAMM41Q96BW9 452 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 ZNF514Q96K75 400 aaPredicted RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 C7orf50Q9BRJ6 194 aaKnown RBP0.95□□□□□ -2.26
VPS13A-206ENST00000376646 TMEM208Q9BTX3 173 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 C11orf49Q9H6J7 331 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 WASHC3Q9Y3C0 194 aa0.95□□□□□ -2.26
VPS13A-206ENST00000376646 CLUHO75153 1309 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 CRB1P82279 1406 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 DAPL1A0PJW8 107 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 C3orf84H3BNL1 204 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 ORM1P02763 201 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 C1DQ13901 141 aaKnown RBP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 PDGFRLQ15198 375 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 MAPK14Q16539 360 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TRMT12Q53H54 448 aaKnown RBP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 FAM45BPQ6NSW5 357 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TMPPEQ6ZT21 453 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TMEM75Q8N9X5 138 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 SMIM12Q96EX1 92 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 GTSF1LQ9H1H1 148 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 EURLQ9NYK6 297 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TMEM216Q9P0N5 145 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 CACNA1SQ13698 1873 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 CHD2O14647 1828 aaKnown RBP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 SHANK3Q9BYB0 1731 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 IGSF23A1L1A6 192 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 FABP12A6NFH5 140 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 METTL15A6NJ78 407 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 A8MWP6 167 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 FTCDNL1E5RQL4 147 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 ARL6IP5O75915 188 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 FBP1P09467 338 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 CD40LGP29965 261 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 PPP1CCP36873 323 aaKnown RBP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 PSMB3P49720 205 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 CLDN12P56749 244 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 ACTBP60709 375 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 ACTG1P63261 375 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 SMAGPQ0VAQ4 97 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 PDK2Q15119 407 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 EXOC3L4Q17RC7 722 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 C4orf26Q17RF5 130 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 DNAL1Q4LDG9 190 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 RIBC1Q8N443 379 aaPredicted RBP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 OR5K1Q8NHB7 308 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 DCUN1D5Q9BTE7 237 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 MED18Q9BUE0 208 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 METTL9Q9H1A3 318 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 WDR54Q9H977 334 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TAS2R9Q9NYW1 312 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 GLS2Q9UI32 602 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 PUS1Q9Y606 427 aaKnown RBP eCLIP0.94□□□□□ -2.26
VPS13A-206ENST00000376646 LCTP09848 1927 aa0.94□□□□□ -2.26
VPS13A-206ENST00000376646 TRPM3Q9HCF6 1732 aaPredicted RBP0.93□□□□□ -2.26
VPS13A-206ENST00000376646 ITGB4P16144 1822 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 ATAD5Q96QE3 1844 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 GOLGA6L10A6NI86 522 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 G3V3Q6 166 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 CETN3O15182 167 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 CRYGDP07320 174 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 OCMP0CE72 109 aaPredicted RBP0.93□□□□□ -2.26
VPS13A-206ENST00000376646 AGTR1P30556 359 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 GZMMP51124 257 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 SPATA31B1PQ5VZV4 182 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 ZFAND2AQ8N6M9 145 aa0.93□□□□□ -2.26
VPS13A-206ENST00000376646 OR5L1Q8NGL2 311 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms