RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 A0A087WWC5 75 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 VDAC1P21796 283 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 UCP1P25874 307 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 SRD5A2P31213 254 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 PRDX4Q13162 271 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 KRTAP27-1Q3LI81 207 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 WDR25Q64LD2 544 aaPredicted RBP12.92□□□□□ -0.34
MSH5-203ENST00000375750 PRR18Q8N4B5 295 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 CPT1CQ8TCG5 803 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 IL1F10Q8WWZ1 152 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
MSH5-203ENST00000375750 MEGF10Q96KG7 1140 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 A0A1B0GV90 55 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 LILRA1O75019 489 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
MSH5-203ENST00000375750 C14orf144Q96I85 54 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 UNKLQ9H9P5 680 aaKnown RBP12.92□□□□□ -0.34
MSH5-203ENST00000375750 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
MSH5-203ENST00000375750 NAPSAO96009 420 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 GDF1P27539 372 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 SRPXP78539 464 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 TLE4Q04727 773 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 FOXO1Q12778 655 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 PRRG4Q9BZD6 226 aa12.92□□□□□ -0.34
MSH5-203ENST00000375750 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 IGHV3-64DA0A0J9YX35 117 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 BTBD17A6NE02 478 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 NGFP01138 241 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 SRYQ05066 204 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 RNASE11Q8TAA1 199 aaKnown RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 ERRFI1Q9UJM3 462 aaPredicted RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 ZNF292O60281 2723 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
MSH5-203ENST00000375750 OR1C1Q15619 314 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 PCSK4Q6UW60 755 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 HAPLN4Q86UW8 402 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 VASH2Q86V25 355 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
MSH5-203ENST00000375750 C5orf49A4QMS7 147 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 RPS16P62249 146 aaKnown RBP12.9□□□□□ -0.34
MSH5-203ENST00000375750 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 ZNF552Q9H707 407 aaPredicted RBP12.9□□□□□ -0.34
MSH5-203ENST00000375750 CEBPZOSA8MTT3 80 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 KIAA1324LA8MWY0 1029 aaPredicted RBP12.9□□□□□ -0.34
MSH5-203ENST00000375750 TUSC2O75896 110 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 CACNG5Q9UF02 275 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 PPP1R3CQ9UQK1 317 aa12.9□□□□□ -0.34
MSH5-203ENST00000375750 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 OR5H1A6NKK0 313 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 CELA3AP09093 270 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 IL24Q13007 206 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 OR8G5Q8NG78 346 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 OR2M7Q8NG81 312 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 RBMXL1Q96E39 390 aaKnown RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 IFNA5P01569 189 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 CEACAM1P13688 526 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 F2RP25116 425 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 STX12Q86Y82 276 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
MSH5-203ENST00000375750 CA5BP1Q8WTZ4 195 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 FER1L6-AS2Q96M78 137 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 GFOD1Q9NXC2 390 aa12.89□□□□□ -0.35
MSH5-203ENST00000375750 CLEC18AA5D8T8 446 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 BCL2P10415 239 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 BAXQ07812 192 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 CLEC18CQ8NCF0 446 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 OR5D13Q8NGL4 314 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 MRPL30Q8TCC3 161 aaKnown RBP12.88□□□□□ -0.35
MSH5-203ENST00000375750 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
MSH5-203ENST00000375750 C1QTNF5Q9BXJ0 243 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 SIRT7Q9NRC8 400 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 UFSP2Q9NUQ7 469 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 A0A1B0GU03 582 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 GJE1A6NN92 205 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 NKX2-8O15522 239 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 SERPINE2P07093 398 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 TUBG1P23258 451 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 FGF12P61328 243 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 CLN3Q13286 438 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 C1orf87Q8N0U7 546 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
MSH5-203ENST00000375750 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms