RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 H0Y980 276 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 HS3ST1O14792 307 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 DFFBO76075 338 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 TSPAN7P41732 249 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 PCSK4Q6UW60 755 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 RNASE11Q8TAA1 199 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF845Q96IR2 970 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 CFAP47Q6ZTR5 3102 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 DIDO1Q9BTC0 2240 aaKnown RBP12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 KIAA2026Q5HYC2 2103 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 NCKAP5O14513 1909 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A096LPE4 126 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 DUXBA0A1W2PPF3 345 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A1W2PPZ6 126 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 CEBPZOSA8MTT3 80 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 SYNGR1O43759 233 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 CYB5R3P00387 301 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 RND2P52198 227 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 CLDN15P56746 228 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 FGF12P61328 243 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 WDR25Q64LD2 544 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 OR10G4Q8NGN3 311 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 OR10D3Q8NH80 312 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 SCGB1C1Q8TD33 95 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 STRADBQ9C0K7 418 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 ERRFI1Q9UJM3 462 aaPredicted RBP12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.48
CLCNKA-202ENST00000375692 TRAPPC6AO75865 159 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 SERPINE2P07093 398 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 DDTP30046 118 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 IL2RGP31785 369 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 CLN3Q13286 438 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 WIPI1Q5MNZ9 446 aaPredicted RBP12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 NECAP1Q8NC96 275 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 Q8NFD4 153 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 M1APQ8TC57 530 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 RDH5Q92781 318 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 RCC1LQ96I51 464 aaKnown RBP12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 C1QTNF5Q9BXJ0 243 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 HIPK2Q9H2X6 1198 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 UFSP2Q9NUQ7 469 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 OR14J1Q9UGF5 321 aa12.02□□□□□ -0.49
CLCNKA-202ENST00000375692 GJE1A6NN92 205 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 ELLP55199 621 aaPredicted RBP12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 PCBD1P61457 104 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 HAPLN4Q86UW8 402 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 IL1F10Q8WWZ1 152 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 SPSB4Q96A44 273 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 CACNG5Q9UF02 275 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 A0A087X0M5 115 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 A0A1B0GX30 115 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 IGKV1-39P01597 117 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 IGKV1D-39P04432 117 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 KIR2DS1Q14954 304 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 OR8G1Q15617 311 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 DMRTC2Q8IXT2 367 aaPredicted RBP12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 UBALD1Q8TB05 177 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 RBKSQ9H477 322 aa12.01□□□□□ -0.49
CLCNKA-202ENST00000375692 SMCO3A2RU48 225 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 ARGFXA6NJG6 315 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 CNOT4O95628 575 aaKnown RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 PKIAP61925 76 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 REC114Q7Z4M0 266 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 ZNF525Q8N782 197 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 MRPL30Q8TCC3 161 aaKnown RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 TECTBQ96PL2 329 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 PLK3Q9H4B4 646 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 PSENENQ9NZ42 101 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 C5orf49A4QMS7 147 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 TRAPPC2LH3BP13 241 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 NBL1P41271 181 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 MLF1P58340 268 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 PNRC1Q12796 327 aaPredicted RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 IL22RA2Q969J5 263 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 RAB40CQ96S21 281 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
CLCNKA-202ENST00000375692 PRRG4Q9BZD6 226 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 WDR54Q9H977 334 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 OR1A1Q9P1Q5 309 aa12□□□□□ -0.49
CLCNKA-202ENST00000375692 PPP1R3CQ9UQK1 317 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms