RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 FOLR2P14207 255 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 OR10D3Q8NH80 312 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 ASB10Q8WXI3 467 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 A0A1W2PRD5 423 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 A0A1W2PRF3 423 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 A0A1W2PRM7 423 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 GRIFINA4D1Z8 144 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 HLA-DQA1P01909 254 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 PRRX1P54821 245 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 KIAA1644Q3SXP7 199 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 OR11H4Q8NGC9 324 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 OR2Y1Q8NGV0 311 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 IP6K3Q96PC2 410 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 ZNF576Q9H609 170 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 TREM2Q9NZC2 230 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 C16orf47Q6ZP98 133 aaPredicted RBP17.31■□□□□ 0.36
COL15A1-201ENST00000375001 PCOLCE2Q9UKZ9 415 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 PQLC2LA1A4F0 135 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 ID4P47928 161 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 AMMECR1LQ6DCA0 310 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 TMEM252Q8N6L7 170 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 GABRG3Q99928 467 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 MPC1Q9Y5U8 109 aa17.31■□□□□ 0.36
COL15A1-201ENST00000375001 LDLRAD4O15165 306 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 APELAP0DMC3 54 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 HOXA4Q00056 320 aaPredicted RBP17.3■□□□□ 0.36
COL15A1-201ENST00000375001 TMEM211Q6ICI0 200 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 LILRA6Q6PI73 481 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 HOGA1Q86XE5 327 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 PAXXQ9BUH6 204 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 METTL1Q9UBP6 276 aaKnown RBP17.3■□□□□ 0.36
COL15A1-201ENST00000375001 COL4A1P02462 1669 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 OR2I1PQ8NGU4 316 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 MPTX1A8MV57 137 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 TSPAN13O95857 204 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 SRIP30626 198 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 ZFP36L2P47974 494 aaKnown RBP17.3■□□□□ 0.36
COL15A1-201ENST00000375001 GALNSP34059 522 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 LOXL2Q9Y4K0 774 aa17.3■□□□□ 0.36
COL15A1-201ENST00000375001 COA4Q9NYJ1 87 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 SIRT4Q9Y6E7 314 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-201ENST00000375001 NUDT3O95989 172 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 HLA-DRB1P01911 266 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 KLF3P57682 345 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PLA2G3Q9NZ20 509 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 TRGV5A0A0B4J1U4 118 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 LINC01565O15544 149 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PRSS2P07478 247 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 TNFAIP6P98066 277 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-201ENST00000375001 ERASQ7Z444 233 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PTCRAQ6ISU1 281 aaPredicted RBP17.29■□□□□ 0.36
COL15A1-201ENST00000375001 FAM216AQ8WUB2 273 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PGLYRP3Q96LB9 341 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 PRNDQ9UKY0 176 aa17.29■□□□□ 0.36
COL15A1-201ENST00000375001 RNASE1P07998 156 aaKnown RBP17.28■□□□□ 0.36
COL15A1-201ENST00000375001 TM4SF19Q96DZ7 209 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 COX14Q96I36 57 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 GMPPAQ96IJ6 420 aaPredicted RBP17.28■□□□□ 0.36
COL15A1-201ENST00000375001 IER2Q9BTL4 223 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 SFTPA2Q8IWL1 248 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 SFTPA1Q8IWL2 248 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 FAM169BQ8N8A8 192 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 Q8WTZ3 238 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 IGHV3-21A0A0B4J1V1 117 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 TRGV8A0A0C4DH27 118 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 MOSPD3O75425 235 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 PNLIPP16233 465 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 CKS2P33552 79 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 SRSF5Q13243 272 aaKnown RBP17.28■□□□□ 0.36
COL15A1-201ENST00000375001 NHLRC3Q5JS37 347 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 CXXC4Q9H2H0 198 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 DNAJC4Q9NNZ3 241 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 PEF1Q9UBV8 284 aaKnown RBP17.28■□□□□ 0.36
COL15A1-201ENST00000375001 NPIPB8E9PQR5 432 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 AGAP20933 346 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 OR6X1Q8NH79 312 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 VSTM2LQ96N03 204 aa17.28■□□□□ 0.36
COL15A1-201ENST00000375001 CDIPTO14735 213 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 LYZL6O75951 148 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 PPP1CCP36873 323 aaKnown RBP17.27■□□□□ 0.36
COL15A1-201ENST00000375001 RND3P61587 244 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 TGIF1Q15583 401 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 LSM10Q969L4 123 aaKnown RBP17.27■□□□□ 0.36
COL15A1-201ENST00000375001 NUDT16L1Q9BRJ7 211 aaKnown RBP17.27■□□□□ 0.36
COL15A1-201ENST00000375001 UBTD1Q9HAC8 227 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 ST6GALNAC2Q9UJ37 374 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 USP54Q70EL1 1684 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 LINC01387J3KSC0 135 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 GABRG2P18507 467 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 CTGFP29279 349 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 RNPS1Q15287 305 aaKnown RBP17.27■□□□□ 0.36
COL15A1-201ENST00000375001 MRPS18BQ9Y676 258 aaKnown RBP17.27■□□□□ 0.36
COL15A1-201ENST00000375001 PXMP4Q9Y6I8 212 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 LINC00587B1AMM8 73 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 HLA-DQB1P01920 261 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 ACER2Q5QJU3 275 aa17.27■□□□□ 0.36
COL15A1-201ENST00000375001 OPN3Q9H1Y3 402 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms