RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CTF1Q16619 201 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 PLA1AQ53H76 456 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 OLFML2AQ68BL7 652 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 ZNF880Q6PDB4 577 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 MOB1BQ7L9L4 216 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 CLVS1Q8IUQ0 354 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-202ENST00000374180 RAB2BQ8WUD1 216 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 SLC25A46Q96AG3 418 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 PHF21AQ96BD5 680 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 OR2S2Q9NQN1 319 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 SPATA2Q9UM82 520 aa12.92□□□□□ -0.34
HDHD3-202ENST00000374180 AMMECR1Q9Y4X0 333 aaPredicted RBP12.92□□□□□ -0.34
HDHD3-202ENST00000374180 POM121CA8CG34 1229 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 SERPINE3A8MV23 424 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 OR10X1Q8NGY0 326 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 ABCB10Q9NRK6 738 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 MGAT4AQ9UM21 535 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 STAB1Q9NY15 2570 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 A0A1W2PPE3 182 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 FAM181BA6NEQ2 426 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 MFNGO00587 321 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 CRYBA1P05813 215 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 RAB13P51153 203 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 HTD2P86397 168 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 ARFRP1Q13795 201 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 HMGN3Q15651 99 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 Q3ZCU0 254 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
HDHD3-202ENST00000374180 Q6ZPA2 131 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 OR10V1Q8NGI7 309 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 GCDHQ92947 438 aaPredicted RBP12.91□□□□□ -0.34
HDHD3-202ENST00000374180 Q9N2K0 584 aa12.91□□□□□ -0.34
HDHD3-202ENST00000374180 LY6LH3BQJ8 138 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 GPR137BO60478 399 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 TALDO1P37837 337 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 MADCAM1Q13477 382 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 LY6EQ16553 131 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 TPTE2P1Q5T6R2 138 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 C8orf31Q8N9H6 132 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 OR52L2PQ8NGH6 319 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 IL1F10Q8WWZ1 152 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 ISOC1Q96CN7 298 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
HDHD3-202ENST00000374180 SLC25A38Q96DW6 304 aa12.9□□□□□ -0.34
HDHD3-202ENST00000374180 RORCP51449 518 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 MORN2Q502X0 79 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 LINC00311Q8N616 119 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 RPEQ96AT9 228 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 OCSTAMPQ9BR26 566 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 DCSTAMPQ9H295 470 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDHD3-202ENST00000374180 DIABLOQ9NR28 239 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 JPT1Q9UK76 154 aa12.89□□□□□ -0.35
HDHD3-202ENST00000374180 A0A0A6YYH2 397 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 A6NJ64 397 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 YPEL1O60688 119 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 RGS11O94810 467 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 GSTP1P09211 210 aaKnown RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 HKR1P10072 659 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 BRS3P32247 399 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 PPP1CCP36873 323 aaKnown RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 MNDAP41218 407 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 DYNLT3P51808 116 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 RPL15P61313 204 aaKnown RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 HLA-DRB3P79483 266 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 HACD4Q5VWC8 232 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 CCDC144NLQ6NUI1 221 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 SAMD12Q8N8I0 201 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 S100A16Q96FQ6 103 aaKnown RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 YPEL2Q96QA6 119 aa12.88□□□□□ -0.35
HDHD3-202ENST00000374180 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
HDHD3-202ENST00000374180 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 FCGR3AP08637 254 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 SCTP09683 121 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 IL3RAP26951 378 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 ZNF134P52741 427 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 GNMTQ14749 295 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 CT45A1Q5HYN5 189 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 UBE2NLQ5JXB2 153 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
HDHD3-202ENST00000374180 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 CT45A3Q8NHU0 189 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 ABCG5Q9H222 651 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 ZNF230Q9UIE0 474 aaPredicted RBP12.87□□□□□ -0.35
HDHD3-202ENST00000374180 PITPNC1Q9UKF7 332 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
HDHD3-202ENST00000374180 TMEM235A6NFC5 223 aa12.86□□□□□ -0.35
HDHD3-202ENST00000374180 SLC31A2O15432 143 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms