RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 DIRC2Q96SL1 478 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 NPAS1Q99742 590 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 C1RLQ9NZP8 487 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 LPAR3Q9UBY5 353 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF629Q9UEG4 869 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-202ENST00000372216 URB1O60287 2271 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 SCGB1A1P11684 91 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF154Q13106 437 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 MRPL54Q6P161 138 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 VSTM2AQ8TAG5 236 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 LEAP2Q969E1 77 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 NTNG2Q96CW9 530 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF426Q9BUY5 554 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 SH2D2AQ9NP31 389 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 SLC45A2Q9UMX9 530 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 MOB4Q9Y3A3 225 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 WIPI2Q9Y4P8 454 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 A0A0B4J293 547 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF561Q8N587 486 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 WNT2BQ93097 391 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 S4R3C0 116 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 TGOLN2O43493 480 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 C1QCP02747 245 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 THY1P04216 161 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 GZMHP20718 246 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 LTBRP36941 435 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 P2RY6Q15077 328 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 PCOLCEQ15113 449 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 MUC20Q8N307 709 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 OR1L6Q8NGR2 347 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 METTL1Q9UBP6 276 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 CROCCQ5TZA2 2017 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 KIR3DL2P43630 455 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 C4orf51C9J302 202 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 TIAF1O95411 115 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 P01737 135 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 PCMT1P22061 227 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 CACNG7P62955 275 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 HLA-DRB3P79483 266 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 PRSS53Q2L4Q9 553 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 C8orf82Q6P1X6 216 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 UNQ9370/PRO34162Q6UXP9 181 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF66Q6ZN08 573 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 TMEM105Q8N8V8 129 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 DDB2Q92466 427 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 MFNGO00587 321 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 CST4P01036 141 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 S100A8P05109 93 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 LCN2P80188 198 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 DHRS2Q13268 280 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 DEFB121Q5J5C9 76 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 SLIRPQ9GZT3 109 aaKnown RBP8.51□□□□□ -1.05
COL4A6-202ENST00000372216 PRO1933Q9H354 126 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 OR51B2Q9Y5P1 312 aa8.51□□□□□ -1.05
COL4A6-202ENST00000372216 PSMB11A5LHX3 300 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ASAH2BP0C7U1 165 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 MVDP53602 400 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF273Q14593 569 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 SCARF2Q96GP6 870 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 WDFY2Q96P53 400 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ANXA10Q9UJ72 324 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 KLHDC2Q9Y2U9 406 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 BRCA1P38398 1863 aaKnown RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 A0A1B0GU03 582 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ANKRD20A5PA0PJZ0 165 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 PTP4A3O75365 173 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 COL8A1P27658 744 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 SPCS3P61009 180 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 HERVK_113P61574 105 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 GCSAMLQ5JQS6 135 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 OR4C12Q96R67 309 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 CHST5Q9GZS9 411 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 TUBGCP6Q96RT7 1819 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 CLDN14O95500 239 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 GCGP01275 180 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 PRDX2P32119 198 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ST3GAL2Q16842 350 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 GAPTQ8N292 157 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ITLN2Q8WWU7 325 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 TBX15Q96SF7 602 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 RNF122Q9H9V4 155 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 PROB1E7EW31 1015 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 RPL36A-HNRNPH2H7BZ11 118 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 CRISP2P16562 243 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 GZMMP51124 257 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ARF6P62330 175 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 POLR2GP62487 172 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 PMS2P11Q13670 270 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 MPV17LQ2QL34 196 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 C1orf174Q8IYL3 243 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms