RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 SHISA4Q96DD7 197 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 WDR34Q96EX3 536 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 CA10Q9NS85 328 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 PQLC2LA1A4F0 135 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 C10orf128Q5T292 105 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 SCAND1P57086 179 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 OR5AN1Q8NGI8 311 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 IDSB3KWA1 339 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 TMEM50BP56557 158 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 LRP6O75581 1613 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 ANK1P16157 1881 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 ARHGAP21Q5T5U3 1957 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 IGKV3D-11A0A0A0MRZ8 115 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 RRN3P1Q2M238 152 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 C16orf52Q8NHV5 167 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 PTGESO14684 152 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 LHFPL4Q7Z7J7 247 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 GAPTQ8N292 157 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 MRAPQ8TCY5 172 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 MRGPRX4Q96LA9 322 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 NTHL1P78549 312 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 SLC45A1Q9Y2W3 748 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 IGKV3D-15A0A087WSY6 115 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 NKX2-6A6NCS4 301 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 IGKV3-15P01624 115 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 MEF2BQ02080 365 aaPredicted RBP13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 SDK2Q58EX2 2172 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 NPIPB6E9PJ23 425 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 CTDSPLO15194 276 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 KIR3DX1Q9H7L2 352 aa13.5□□□□□ -0.25
GTF3C4-201ENST00000372146 PRKNO60260 465 aaPredicted RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 RAE1P78406 368 aaKnown RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 AGAP20933 346 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 ATP6V0CP27449 155 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 YPEL5P62699 121 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 PLAURQ03405 335 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 AICDAQ9GZX7 198 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 TNFRSF19Q9NS68 423 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 PTP4A3O75365 173 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 KISS1RQ969F8 398 aaPredicted RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 FXYD3Q14802 87 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 GDF9O60383 454 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 OR1N1Q8NGS0 311 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 ABHD14BQ96IU4 210 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 K7ESM1 405 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 PTPMT1Q8WUK0 201 aaPredicted RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 CDX4O14627 284 aaPredicted RBP13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 KCNE5Q9UJ90 142 aa13.49□□□□□ -0.25
GTF3C4-201ENST00000372146 MFAP4P55083 255 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 EIF3IQ13347 325 aaKnown RBP13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 MYOZ1Q9NP98 299 aaPredicted RBP13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 CGB1A6NKQ9 187 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 EPPINO95925 133 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 SEC11BP0C7V7 166 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 HOXC13P31276 330 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 LYZL2Q7Z4W2 148 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 OR2K2Q8NGT1 345 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 RTN4RQ9BZR6 473 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 HIGD1AQ9Y241 93 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 TRBV9A0A0B4J1U6 114 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 CXCL2P19875 107 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 PSG6Q00889 435 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 CLLU1OSQ5K130 101 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 MBNL2Q5VZF2 373 aaKnown RBP13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 PQLC2Q6ZP29 291 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 A0A087WUJ7 227 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 A0A1B0GU03 582 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 IL2RAP01589 272 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 PDCD6O75340 191 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 C12orf73Q69YU5 71 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 NCKAP5O14513 1909 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 C3orf80F5H4A9 247 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 FADS6Q8N9I5 356 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 C17orf47Q8NEP4 570 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 FGF17O60258 216 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 TNFRSF1AP19438 455 aa13.48□□□□□ -0.25
GTF3C4-201ENST00000372146 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms