RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RREB1Q92766 1687 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 PPP1CCP36873 323 aaKnown RBP13.45□□□□□ -0.26
COL5A1-201ENST00000371817 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 PPP1R17O96001 155 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 MOGAT3Q86VF5 341 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 OR4C3Q8NH37 302 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 ASCL3Q9NQ33 180 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-201ENST00000371817 ATAD5Q96QE3 1844 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 SUMO3P55854 103 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-201ENST00000371817 KCNE5Q9UJ90 142 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 PROCRQ9UNN8 238 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 AMER3Q8N944 861 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 FLRT3Q9NZU0 649 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM189A5PLL7 270 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 DHHO43323 396 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 HPRT1P00492 218 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 WNT5AP41221 380 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 OR1N1Q8NGS0 311 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 MMP25Q9NPA2 562 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 IGHV3-20A0A0C4DH32 117 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 FBXO46Q6PJ61 603 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-201ENST00000371817 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 BIVMQ86UB2 503 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 RFESDQ8TAC1 157 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 MRPL24Q96A35 216 aaKnown RBP13.44□□□□□ -0.26
COL5A1-201ENST00000371817 NEU1Q99519 415 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 FOXC2Q99958 501 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 HES7Q9BYE0 225 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 TRAV39A0A0B4J263 110 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 ZNF441Q8N8Z8 693 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 PTPRFP10586 1907 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 MPDU1O75352 247 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 HIST1H1AQ02539 215 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-201ENST00000371817 Q8WTZ3 238 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 PGLYRP4Q96LB8 373 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 H0YL77 283 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM50AO95807 157 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 HYAL1Q12794 435 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 TCF23Q7RTU1 214 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 SLC37A2Q8TED4 501 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 PTPRDP23468 1912 aa13.44□□□□□ -0.26
COL5A1-201ENST00000371817 COL1A1P02452 1464 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 ERGP11308 486 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 ZADH2Q8N4Q0 377 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 FAM222BQ8WU58 562 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 APOMO95445 188 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 RLN3Q8WXF3 142 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 C10orf35Q96D05 121 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 PRNDQ9UKY0 176 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 EIF3IQ13347 325 aaKnown RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 CEACAM16Q2WEN9 425 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 NDUFAF3Q9BU61 184 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 MYOZ1Q9NP98 299 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 hADV38S2A0JD32 116 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 K7ESM1 405 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 HKR1P10072 659 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 DMKNQ6E0U4 476 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 CISD1Q9NZ45 108 aaKnown RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 GCM2O75603 506 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 ZNF865P0CJ78 1059 aaPredicted RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
COL5A1-201ENST00000371817 ASPDHA6ND91 283 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 OR11H12B2RN74 326 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 J3KRW8 73 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 OR11H2Q8NH07 326 aa13.43□□□□□ -0.26
COL5A1-201ENST00000371817 SPRY3O43610 288 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TUBD1Q9UJT1 453 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 MRGPRDQ8TDS7 321 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 IL2RAP01589 272 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 OR4D9Q8NGE8 314 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 OR10AC1Q8NH08 325 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 CDCA3Q99618 268 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-201ENST00000371817 CCL11P51671 97 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 HMGA2P52926 109 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 OR13C6PQ8NH95 151 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 FGF13Q92913 245 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 C5orf30Q96GV9 206 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM160Q9NX00 188 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 OGG1O15527 345 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TSPAN2O60636 221 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TNFSF10P50591 281 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 RND1Q92730 232 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
COL5A1-201ENST00000371817 FRRS1LQ9P0K9 344 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 DNAJC25-GNG10A0A024R161 153 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 TNXAQ16473 311 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 NPVFQ9HCQ7 196 aa13.42□□□□□ -0.26
COL5A1-201ENST00000371817 LOC390937A0A1W2PQ73 354 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms