RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CENPXA8MT69 81 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 K7EMT4 169 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 CLDN14O95500 239 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 PLAUP00749 431 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 AVPP01185 164 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 S100A8P05109 93 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 IFI30P13284 250 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SRIP30626 198 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 TFPI2P48307 235 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ERVFRD-1P60508 538 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SLC35A1P78382 337 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 PLCXD2Q0VAA5 305 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ZNF846Q147U1 533 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 CDK10Q15131 360 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR8B8Q15620 311 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 LRRC36Q1X8D7 754 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 TP53I3Q53FA7 332 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ARMCX4Q5H9R4 360 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ZNF880Q6PDB4 577 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 XKRXQ6PP77 449 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FAM131AQ6UXB0 335 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 TMPPEQ6ZT21 453 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OAFQ86UD1 273 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SLC35F2Q8IXU6 374 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 SAXO1Q8IYX7 474 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ACBD7Q8N6N7 88 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 GDPD1Q8N9F7 314 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 OR4M2Q8NGB6 313 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 RNASE11Q8TAA1 199 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 ASB13Q8WXK3 278 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 FAM173AQ9BQD7 235 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 COMMD4Q9H0A8 199 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ARL6Q9H0F7 186 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 ISG20L2Q9H9L3 353 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 NUFIP1Q9UHK0 495 aaKnown RBP3.22□□□□□ -1.89
MCF2-203ENST00000370576 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 RP1P56715 2156 aa3.22□□□□□ -1.89
MCF2-203ENST00000370576 IGKV1D-43A0A0B4J1Z2 117 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 MED19A0JLT2 244 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 A1L4Q6 167 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 C7orf66A4D0T2 115 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 LEUTXA8MZ59 168 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 K7ENP7 123 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 GABRPO00591 440 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 MED14OSP0DP75 135 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 AQP1P29972 269 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 HTR5AP47898 357 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SSR4P51571 173 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 UBE2KP61086 200 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 RPS25P62851 125 aaKnown RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 MSMO1Q15800 293 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 LRRC75BQ2VPJ9 315 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 FBXL19-AS1Q494R0 122 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 CD300EQ496F6 205 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 Q6ZS92 163 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 OSR2Q8N2R0 312 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 OR4P4Q8NGL7 312 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SLC25A38Q96DW6 304 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 NKX3-1Q99801 234 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 SHARPINQ9H0F6 387 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 R4GMQ9 66 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 A0A1W2PPI3 338 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 TMEM212A6NML5 194 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SULT1C2O00338 296 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 ORC5O43913 435 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 GATA3P23771 443 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SHC1P29353 583 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 FOLR3P41439 243 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 GNG3P63215 75 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 DEFA6Q01524 100 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 POU3F1Q03052 451 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 ZNF404Q494X3 552 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 STPG1Q5TH74 334 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 PEG10Q86TG7 708 aaKnown RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 RPS19BP1Q86WX3 136 aaKnown RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 C1orf174Q8IYL3 243 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 ZADH2Q8N4Q0 377 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 OR52N5Q8NH56 324 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 ZNRF2Q8NHG8 242 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SLC25A44Q96H78 314 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 SRXN1Q9BYN0 137 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 CHIAQ9BZP6 476 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 VCX3AQ9NNX9 186 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 BIN3Q9NQY0 253 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 FBXL4Q9UKA2 621 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 ALG5Q9Y673 324 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 TMEM14AQ9Y6G1 99 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 TMEM14DPA8MWL7 114 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 G3V4G9 280 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 STATHP02808 62 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 CCL3P10147 92 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 GLP1RP43220 463 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 PPP3R1P63098 170 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 FMODQ06828 376 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 PUDPQ08623 228 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 MYBPHQ13203 477 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SRSF9Q13242 221 aaKnown RBP eCLIP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms