RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 A0A1W2PPE3 182 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 BUB1B-PAK6H3BSN5 160 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 FCGR3AP08637 254 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 RORCP51449 518 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 LOXL3P58215 753 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 GNMTQ14749 295 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 LDLRAD2Q5SZI1 272 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 Q6ZPA2 131 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 DYNAPQ8N1N2 210 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 FAM216AQ8WUB2 273 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 AP3S1Q92572 193 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 TOMM40LQ969M1 308 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 RPEQ96AT9 228 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 SSX3Q99909 188 aa12.01□□□□□ -0.49
COL9A1-204ENST00000370496 A0A0A6YYH2 397 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 TMEM235A6NFC5 223 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 A6NJ64 397 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 POM121CA8CG34 1229 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 RGS11O94810 467 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 GSTP1P09211 210 aaKnown RBP12□□□□□ -0.49
COL9A1-204ENST00000370496 IL3RAP26951 378 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 TMBIM6P55061 237 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 GNG2P59768 71 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 MADCAM1Q13477 382 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 AANATQ16613 207 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 Q3ZCU0 254 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 CDNFQ49AH0 187 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 TPTE2P1Q5T6R2 138 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 STEAP3Q658P3 488 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 ACOT12Q8WYK0 555 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 BCL7BQ9BQE9 202 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 MEGF9Q9H1U4 602 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 Q9N2K0 584 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
COL9A1-204ENST00000370496 DIABLOQ9NR28 239 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 COMMD3Q9UBI1 195 aa12□□□□□ -0.49
COL9A1-204ENST00000370496 TRAV18A0A075B6X5 111 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 CCDC160A6NGH7 325 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 HSPA12AO43301 675 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 CRYBA1P05813 215 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 PPP1CCP36873 323 aaKnown RBP11.99□□□□□ -0.49
COL9A1-204ENST00000370496 KIR2DS4P43632 304 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 HTD2P86397 168 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 KIR2DS1Q14954 304 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 LY6EQ16553 131 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 HACD4Q5VWC8 232 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 FAM53AQ6NSI3 398 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-204ENST00000370496 CCDC144NLQ6NUI1 221 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 C5orf24Q7Z6I8 188 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 IZUMO1Q8IYV9 350 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 C8orf31Q8N9H6 132 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 NUDCD2Q8WVJ2 157 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 ABHD14AQ9BUJ0 271 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 SLC23A1Q9UHI7 598 aa11.99□□□□□ -0.49
COL9A1-204ENST00000370496 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 GPR137BO60478 399 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 SOX6P35712 828 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 MNDAP41218 407 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 PITPNAQ00169 270 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 SPCS2Q15005 226 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 TMEM69Q5SWH9 247 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 MZT2AQ6P582 158 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 LINC00311Q8N616 119 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 OR2AK2Q8NG84 335 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 MAFIPQ8WZ33 124 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 ISOC1Q96CN7 298 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 S100A16Q96FQ6 103 aaKnown RBP11.98□□□□□ -0.49
COL9A1-204ENST00000370496 MDFIQ99750 246 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 ABCG5Q9H222 651 aa11.98□□□□□ -0.49
COL9A1-204ENST00000370496 ZNF230Q9UIE0 474 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-204ENST00000370496 ELF5Q9UKW6 265 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-204ENST00000370496 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 OOSP1A8MZH6 123 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 TRDCB7Z8K6 153 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 H3BMQ9 156 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 HSD17B6O14756 317 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 SLC31A2O15432 143 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 FABP7O15540 132 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 ZNF182P17025 639 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-204ENST00000370496 DTYMKP23919 212 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 BRS3P32247 399 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 ZNF260Q3ZCT1 412 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 MORN2Q502X0 79 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 DHRS7BQ6IAN0 325 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-204ENST00000370496 SLC25A48Q6ZT89 311 aaKnown RBP11.97□□□□□ -0.49
COL9A1-204ENST00000370496 ZNF439Q8NDP4 499 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 OR4A4PQ8NGN8 299 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 OCSTAMPQ9BR26 566 aa11.97□□□□□ -0.49
COL9A1-204ENST00000370496 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.49
COL9A1-204ENST00000370496 YPEL1O60688 119 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 EIF4EP06730 217 aaKnown RBP11.96□□□□□ -0.49
COL9A1-204ENST00000370496 LPLP06858 475 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 SCTP09683 121 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 ZBTB25P24278 435 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms