RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CEACAM6P40199 344 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 HOXA1P49639 335 aaPredicted RBP15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 PSG7Q13046 419 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 FAM24BQ8N5W8 94 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 LFNGQ8NES3 379 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 LRP5LA4QPB2 252 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 KIAA1324LA8MWY0 1029 aaPredicted RBP15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 CCL11P51671 97 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 SNRPEP62304 92 aaKnown RBP15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 BAXQ07812 192 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 SLC25A24Q6NUK1 477 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF497Q6ZNH5 498 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 TINAGQ9UJW2 476 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 NKX2-8O15522 239 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 TXNL1O43396 289 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 SOX8P57073 446 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 MRPL49Q13405 166 aaKnown RBP15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 AKR1C8PQ5T2L2 129 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF826PQ6ZT77 177 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 STX12Q86Y82 276 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 CNEP1R1Q8N9A8 125 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 ZDHHC11Q9H8X9 412 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 RNF150Q9ULK6 438 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 CNOT1A5YKK6 2376 aaKnown RBP15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 A0A1B0GU03 582 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 hCG_1809904A0A1W2PP81 198 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 A0A1W2PR64 198 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 A0A1W2PRV1 198 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 AGFG2O95081 481 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 TFF1P04155 84 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 TMEM178AQ8NBL3 297 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 LOXL4Q96JB6 756 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 TRIB1Q96RU8 372 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 ATP5SQ99766 215 aa15.3■□□□□ 0.04
UBQLN4-201ENST00000368309 IGKV1-5P01602 117 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 SULT1A1P50225 295 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 ERVK11-1P61568 191 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 GNPNAT1Q96EK6 184 aaPredicted RBP15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 GMPPAQ96IJ6 420 aaPredicted RBP15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 IFT22Q9H7X7 185 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF98A6NK75 572 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 ATXN7O15265 892 aaPredicted RBP15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 MMP9P14780 707 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 PTAFRP25105 342 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 MPV17P39210 176 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 RAB5BP61020 215 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 RPL23AP62750 156 aaKnown RBP15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 TGFBR3Q03167 851 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 OBP2BQ9NPH6 170 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 TMEM9BQ9NQ34 198 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 POLDIP2Q9Y2S7 368 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 WNT9BO14905 357 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 METTL15P1P0C7V9 234 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 TNFSF10P50591 281 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF585BQ52M93 769 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 EGLN1Q9GZT9 426 aa15.29■□□□□ 0.04
UBQLN4-201ENST00000368309 PSPNO60542 156 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 RSG1Q9BU20 258 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 FZR1Q9UM11 496 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 C1orf196B1AJZ1 125 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 SH2D1BO14796 132 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 MT-ND4LP03901 98 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 PGA5P0DJD9 388 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 CBR1P16152 277 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 OR8G1Q15617 311 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 C12orf57Q99622 126 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 ADAM5Q6NVV9 412 aa15.28■□□□□ 0.04
UBQLN4-201ENST00000368309 LAMA5O15230 3695 aa15.27■□□□□ 0.04
UBQLN4-201ENST00000368309 TAS2R30P59541 319 aa15.27■□□□□ 0.04
UBQLN4-201ENST00000368309 ARL16Q0P5N6 197 aa15.27■□□□□ 0.04
UBQLN4-201ENST00000368309 SYNGR2O43760 224 aa15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 MDH2P40926 338 aaKnown RBP15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 OR2B11Q5JQS5 317 aa15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 DRAM1Q8N682 238 aa15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 KLF14Q8TD94 323 aaPredicted RBP15.27■□□□□ 0.03
UBQLN4-201ENST00000368309 A0A1W2PPE3 182 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 IFNA5P01569 189 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 FOLR2P14207 255 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 Q8IYB0 196 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 RAB40CQ96S21 281 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 PSENENQ9NZ42 101 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 HNF4GQ14541 408 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 ZNF146Q15072 292 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 FDCSPQ8NFU4 85 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 OR1L1Q8NH94 360 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 COA4Q9NYJ1 87 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 KIAA1456Q9P272 454 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 USF3Q68DE3 2245 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 A0A1B0GW64 132 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 HAND1O96004 215 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 RAC2P15153 192 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 PAX6P26367 422 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 OR2B8PP59922 312 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 GABRA6Q16445 453 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 UFSP2Q9NUQ7 469 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 TREM2Q9NZC2 230 aa15.26■□□□□ 0.03
UBQLN4-201ENST00000368309 NPIPB11E5RHQ5 1161 aa15.25■□□□□ 0.03
UBQLN4-201ENST00000368309 OR3A1P47881 315 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms