RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 TRAPPC2P0DI81 140 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 TRAPPC2BP0DI82 140 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-205ENST00000368213 LHX2P50458 406 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ATP6V1FQ16864 119 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 FADS6Q8N9I5 356 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ABHD14BQ96IU4 210 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 GOLT1BQ9Y3E0 138 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 TRAV8-7A0A075B6U6 113 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 VSIG10L2P0DP72 767 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 KIR3DL2P43630 455 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 CLDN18P56856 261 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 UBE2L3P68036 154 aaKnown RBP9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SRSF6Q13247 344 aaKnown RBP9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SSX1Q16384 188 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 OR5C1Q8NGR4 320 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 EAF1Q96JC9 268 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-205ENST00000368213 FAM210AQ96ND0 272 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SMIM7Q9BQ49 75 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 DSCR9P59020 149 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 RXFP4Q8TDU9 374 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SCARB1Q8WTV0 552 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 MRGPRFQ96AM1 343 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 NPAS1Q99742 590 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 CACNA1BQ00975 2339 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 NEURL1O76050 574 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 LINC00271P0C7V0 271 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 RRN3P1Q2M238 152 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 MMD2Q8IY49 270 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 NTNG2Q96CW9 530 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SCMH1Q96GD3 660 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 SPRR3Q9UBC9 169 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 FAM24AA6NFZ4 105 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 SEC14L6B5MCN3 397 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 K7ENP7 123 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 SYNGR2O43760 224 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 HPRT1P00492 218 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 THBDP07204 575 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 GZMKP49863 264 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 RPEL1Q2QD12 228 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 C10orf128Q5T292 105 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 METTL26Q96S19 204 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 HDHD3Q9BSH5 251 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 DEPPQ9NTK1 212 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 hCG_38984A0A1B0GV85 526 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 SS18L1O75177 396 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 NDUFB6O95139 128 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 GZMMP51124 257 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 NUP214P35658 2090 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 C9orf170A2RU37 121 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 ZNF729A6NN14 1252 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 RAMP1O60894 148 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 ENDOGQ14249 297 aaKnown RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 C16orf82Q7Z2V1 217 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 OR2T10Q8NGZ9 312 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 OR4A5Q8NH83 315 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 CTDSP1Q9GZU7 261 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 LIMS1P48059 325 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 H3F3CQ6NXT2 135 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 ELOVL1Q9BW60 279 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 A0A1W2PRX2 142 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 NPY1RP25929 384 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 RAB5CP51148 216 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 NECAP1Q8NC96 275 aa9.23□□□□□ -0.93
PTPRK-205ENST00000368213 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-205ENST00000368213 ERVFC1-1P60608 527 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 ERVS71-1P61550 626 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 SURF2Q15527 256 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-205ENST00000368213 RNFT1Q5M7Z0 435 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 XAF1Q6GPH4 301 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 C17orf100A8MU93 164 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 PSG2P11465 335 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 DHRS2Q13268 280 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 TCF20Q9UGU0 1960 aaKnown RBP9.22□□□□□ -0.93
PTPRK-205ENST00000368213 SLC25A17O43808 307 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 IGF2P01344 180 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-205ENST00000368213 MVDP53602 400 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 TPPP2P59282 170 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 BAK1Q16611 211 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 C10orf113Q5VZT2 155 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 ASB13Q8WXK3 278 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 PATJQ8NI35 1801 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 TRIM77I1YAP6 450 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 PPOXP50336 477 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 POLR2GP62487 172 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRK-205ENST00000368213 ROM1Q03395 351 aa9.22□□□□□ -0.93
PTPRK-205ENST00000368213 SP5Q6BEB4 398 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms