RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SRD5A3Q9H8P0 318 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 MOB1AQ9H8S9 216 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 PLEKHA1Q9HB21 404 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 FOXA2Q9Y261 457 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 SNX5Q9Y5X3 404 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 A3GALT2U3KPV4 340 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 LOC107986453A0A1B0GWG9 222 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 ANKRD34BA5PLL1 514 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 MSGN1A6NI15 193 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 H0YJX3 145 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 M0R129 80 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 GATBO75879 557 aaKnown RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CNIH1O95406 144 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CYB5AP00167 134 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 ATF1P18846 271 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 EDN2P20800 178 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 PRDX6P30041 224 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 C21orf33P30042 268 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF137PP52743 207 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 ACTBP60709 375 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CXCR4P61073 352 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CDK5Q00535 292 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 DEFA5Q01523 94 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 C5orf64Q2M2E5 130 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 PAN3Q58A45 887 aaKnown RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CT45A1Q5HYN5 189 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 Q6ZNX1 250 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC25A48Q6ZT89 311 aaKnown RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR10A7Q8NGE5 316 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR10AC1Q8NH08 325 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 CT45A3Q8NHU0 189 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 RGP1Q92546 391 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 FEVQ99581 238 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 FAM103A1Q9BTL3 118 aaKnown RBP6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 EFCAB1Q9HAE3 211 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 GFOD1Q9NXC2 390 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 NUBP2Q9Y5Y2 271 aa6.36□□□□□ -1.39
HMGB1P39-201ENST00000366304 SDCBPO00560 298 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 ATP6V1B2P21281 511 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 ALDH3A2P51648 485 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 TPPP2P59282 170 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 CX3CL1P78423 397 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 PAX5Q02548 391 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 CD300EQ496F6 205 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 LCN12Q6JVE5 192 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 LIN54Q6MZP7 749 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 C5orf24Q7Z6I8 188 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 Q8N402 240 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 C8orf31Q8N9H6 132 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR10G2Q8NGC3 310 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 CNIH3Q8TBE1 160 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 NSMCE2Q96MF7 247 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 PLGRKTQ9HBL7 147 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 ADGRL4Q9HBW9 690 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC25A19Q9HC21 320 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 SPAG4Q9NPE6 437 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 FKBP14Q9NWM8 211 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 RHBDL2Q9NX52 303 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 CNOT2Q9NZN8 540 aaKnown RBP6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 SELENOKQ9Y6D0 94 aa6.35□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 NBR2O15453 112 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 RBMXL2O75526 392 aaKnown RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 NDUFA3O95167 84 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 HSD17B1P14061 328 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 M6PRP20645 277 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 CTAG1AP78358 180 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 TNFRSF9Q07011 255 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 PIGYQ3MUY2 71 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 UTS2BQ765I0 119 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 SPATA24Q86W54 205 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 ODF3L1Q8IXM7 274 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC35F2Q8IXU6 374 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 HS3ST5Q8IZT8 346 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 ARHGAP24Q8N264 748 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 NPBQ8NG41 125 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR10V1Q8NGI7 309 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR52M1Q8NGK5 317 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 CCDC107Q8WV48 283 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 ARL11Q969Q4 196 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 FGGYQ96C11 551 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 OPALINQ96PE5 141 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 CNN2Q99439 309 aaKnown RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 MRPL20Q9BYC9 149 aaKnown RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC23A1Q9UHI7 598 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 TAGLN3Q9UI15 199 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 MAGEL2Q9UJ55 1249 aa6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 KLK5Q9Y337 293 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 SAMHD1Q9Y3Z3 626 aaKnown RBP6.34□□□□□ -1.39
HMGB1P39-201ENST00000366304 TCRBV5S2A0A599 114 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 LANCL1O43813 399 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 PRKYO43930 277 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 APOL3O95236 402 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 SERPINA3P01011 423 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 PRKACBP22694 351 aa6.33□□□□□ -1.4
HMGB1P39-201ENST00000366304 ACTBL2Q562R1 376 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms