RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 MAS1LP35410 378 aa9.52□□□□□ -0.88
CLIP1-203ENST00000361654 MMP16P51512 607 aa9.52□□□□□ -0.88
CLIP1-203ENST00000361654 SLC35E4Q6ICL7 350 aa9.52□□□□□ -0.88
CLIP1-203ENST00000361654 GSX1Q9H4S2 264 aaPredicted RBP9.52□□□□□ -0.88
CLIP1-203ENST00000361654 CYB5R1Q9UHQ9 305 aa9.52□□□□□ -0.88
CLIP1-203ENST00000361654 LNP1A1A4G5 178 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 C5orf52A6NGY3 159 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 HRKO00198 91 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 KLF7O75840 302 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-203ENST00000361654 SULT1A1P50225 295 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 VWA1Q6PCB0 445 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 OR9G1Q8NH87 305 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 ZMAT5Q9UDW3 170 aaKnown RBP9.52□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF137PP52743 207 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 CLEC7AQ9BXN2 247 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
CLIP1-203ENST00000361654 CD160O95971 181 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 FAM157CP0CG43 387 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 IFITM2Q01629 132 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 UQCC3Q6UW78 93 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 IDI2-AS1Q9NZ38 188 aa9.52□□□□□ -0.89
CLIP1-203ENST00000361654 PSG4Q00888 419 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 MOGAT2Q3SYC2 334 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 GPA33Q99795 319 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 IFT22Q9H7X7 185 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 A0A1W2PPV9 198 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 CDC42EP2O14613 210 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 CSN3P07498 182 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 DYNLT3P51808 116 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 SLC6A13Q9NSD5 602 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-203ENST00000361654 CCL27Q9Y4X3 112 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 RREB1Q92766 1687 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 DDX60LQ5H9U9 1706 aaKnown RBP9.51□□□□□ -0.89
CLIP1-203ENST00000361654 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 CXorf1O96002 111 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 RAG2P55895 527 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
CLIP1-203ENST00000361654 SLC22A18ASQ8N1D0 253 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 C2CD4CQ8TF44 421 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 M0R3E3 92 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 CDS2O95674 445 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 OR2T10Q8NGZ9 312 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM37Q8WXS4 190 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
CLIP1-203ENST00000361654 IGHV3-72A0A0B4J1Y9 119 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 C11orf94C9JXX5 98 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 GCGP01275 180 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 CLDN18P56856 261 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 RBM11P57052 281 aaKnown RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SLC25A53Q5H9E4 307 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 MRGPRFQ96AM1 343 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 PRSS50Q9UI38 385 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF107Q9UII5 783 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SPAG17Q6Q759 2223 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 A0A0U1RQV5 110 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 CEACAM18A8MTB9 384 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SOCS1O15524 211 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 TGFAP01135 160 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 CELA2AP08217 269 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 RNF224P0DH78 156 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 WDR25Q64LD2 544 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 FAM53AQ6NSI3 398 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 HSD17B13Q7Z5P4 300 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 OR10AC1Q8NH08 325 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SLC35B3Q9H1N7 401 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 GP6Q9HCN6 339 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 SIRT7Q9NRC8 400 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 LRP5O75197 1615 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 DOCK2Q92608 1830 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 HELTA6NFD8 242 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 MPDU1O75352 247 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 NXF2Q9GZY0 626 aaKnown RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 NIT2Q9NQR4 276 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 NAT8Q9UHE5 227 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 OGG1O15527 345 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 KCNAB3O43448 404 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 MPC2O95563 127 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-203ENST00000361654 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 PIGYQ3MUY2 71 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 BPIFA4PQ86YQ2 179 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 ABHD12Q8N2K0 398 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM186Q96B77 213 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 MMP26Q9NRE1 261 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 A0A0G2JLM5 398 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 ISLRO14498 428 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 TO15178 435 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms