RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ELF5Q9UKW6 265 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-201ENST00000361439 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-201ENST00000361439 A0A0A6YYJ9 748 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 MEIOCA2RUB1 952 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 J3QR06 171 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 SSX5O60225 188 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 ARG1P05089 322 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 COX7A1P24310 79 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 SAA4P35542 130 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 KLRD1Q13241 179 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 PYHIN1Q6K0P9 492 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 LINC00299Q6ZSB3 139 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 IZUMO1Q8IYV9 350 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 GPX8Q8TED1 209 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 ST6GALNAC5Q9BVH7 336 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 MMP28Q9H239 520 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 GHITMQ9H3K2 345 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 FAM96BQ9Y3D0 163 aa11.25□□□□□ -0.61
NSMCE1-201ENST00000361439 OOSP1A8MZH6 123 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 CTDSPLO15194 276 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 IFNA2P01563 188 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 FBP1P09467 338 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 SCTP09683 121 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 HTR1DP28221 377 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 TNFSF8P32971 234 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 CEACAM3P40198 252 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 AANATQ16613 207 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 MORN2Q502X0 79 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 SLC25A48Q6ZT89 311 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 PDZD9Q8IXQ8 264 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 OR4P4Q8NGL7 312 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 IL1F10Q8WWZ1 152 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 EDARADDQ8WWZ3 215 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 DPM3Q9P2X0 92 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 ZNF230Q9UIE0 474 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 SETD2Q9BYW2 2564 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-201ENST00000361439 IGHV3OR16-10A0A075B7F0 116 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 FABP12A6NFH5 140 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 LEUTXA8MZ59 168 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 HSPA12AO43301 675 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 GSTT2BP0CG30 244 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 NAT1P18440 290 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 IL3RAP26951 378 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 ETV6P41212 452 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 RAB7AP51149 207 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 DLX1P56177 255 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 SNX29P2Q8IUI4 249 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 OR6Q1Q8NGQ2 317 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 OR10J5Q8NHC4 309 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 JMJD8Q96S16 334 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 ABHD1Q96SE0 405 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 MEGF9Q9H1U4 602 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-201ENST00000361439 IGKV1-6A0A0C4DH72 117 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 GABARAPH6UMI1 98 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 CEACAM6P40199 344 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 ARHGDIBP52566 201 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 ZNF137PP52743 207 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 ACTBP60709 375 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 ACTG1P63261 375 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 PRB3Q04118 309 aaPredicted RBP11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 IL18Q14116 193 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 HERPUD1Q15011 391 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 LTC4SQ16873 150 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 SPANXN2Q5MJ10 180 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 CCDC190Q86UF4 302 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 LDLRAD3Q86YD5 345 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 OR10X1Q8NGY0 326 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 UBALD1Q8TB05 177 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 FCAMRQ8WWV6 532 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 ABHD14AQ9BUJ0 271 aa11.22□□□□□ -0.61
NSMCE1-201ENST00000361439 IGHV3-43A0A0B4J1X8 118 aa11.21□□□□□ -0.61
NSMCE1-201ENST00000361439 A0A0U1RQK1 487 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms