RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 RBM11P57052 281 aaKnown RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 MRPL28Q13084 256 aaKnown RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 MPV17LQ2QL34 196 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 TMEM30BQ3MIR4 351 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 ZNF497Q6ZNH5 498 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 Q8N1Y9 231 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 GAPTQ8N292 157 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 SYS1Q8N2H4 156 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 OR6Q1Q8NGQ2 317 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 OR52N1Q8NH53 320 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 CCDC107Q8WV48 283 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 MRPL48Q96GC5 212 aaKnown RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 RITA1Q96K30 269 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 MYCBPQ99417 103 aaPredicted RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 GPER1Q99527 375 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 PDCD1LG2Q9BQ51 273 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 TOLLIPQ9H0E2 274 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 ISG20L2Q9H9L3 353 aaKnown RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 ISYNA1Q9NPH2 558 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 NKX1-2Q9UD57 310 aaPredicted RBP6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 DHDHQ9UQ10 334 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 GMPPBQ9Y5P6 360 aa6.62□□□□□ -1.35
COL4A3BP-202ENST00000357457 IGHV3-43A0A0B4J1X8 118 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 TRAV41A0A0B4J266 112 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 C12orf77C9JDV5 145 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 E9PI62 339 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 F8W735 103 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 LINC01619G3V211 115 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 ATP6V0E1O15342 81 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 SAP30O75446 220 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 CDRT1O95170 752 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 IGHV3-43DP0DP04 118 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 SLC2A2P11168 524 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 LSAMPQ13449 338 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 MMDQ15546 238 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 ZFAND6Q6FIF0 208 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 LHFPL3Q86UP9 236 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 SATL1Q86VE3 508 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 NPBQ8NG41 125 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 OR5AK2Q8NH90 309 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 UBALD1Q8TB05 177 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 LGALS12Q96DT0 336 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 CENPNQ96H22 339 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 OR5B12Q96R08 314 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 ALG8Q9BVK2 526 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 JAM3Q9BX67 310 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 METTL9Q9H1A3 318 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 GHITMQ9H3K2 345 aa6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 PAK1IP1Q9NWT1 392 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-202ENST00000357457 SNTNA6NMZ2 147 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 SPINT2O43291 252 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 SOX15O60248 233 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ZNF780AO75290 641 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 HBZP02008 142 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 OR8U9P0C7N5 309 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 FCGR1AP12314 374 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 GABRB1P18505 474 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 MYF6P23409 242 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 SLURP1P55000 103 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ACTBP60709 375 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 MORN2Q502X0 79 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 SYT6Q5T7P8 510 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 LPCAT4Q643R3 524 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 LIN54Q6MZP7 749 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 LYPD6Q86Y78 171 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ODF3L1Q8IXM7 274 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 RGP1Q92546 391 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ISOC1Q96CN7 298 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 FAM192AQ9GZU8 254 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ALX4Q9H161 411 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 RAB9BQ9NP90 201 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 TMEM138Q9NPI0 162 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 IMPAD1Q9NX62 359 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 TAS2R4Q9NYW5 299 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 RCC2Q9P258 522 aaKnown RBP6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 GNG12Q9UBI6 72 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 OAZ3Q9UMX2 235 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 ING4Q9UNL4 249 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 NUBP2Q9Y5Y2 271 aa6.6□□□□□ -1.35
COL4A3BP-202ENST00000357457 A0A1W2PP11 408 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 AIPO00170 330 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 ARPC1BO15143 372 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 NBR2O15453 112 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 SC5DO75845 299 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 NDUFA3O95167 84 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 ALPLP05186 524 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 GTF2F2P13984 249 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 CNTFRP26992 372 aa6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 BLVRBP30043 206 aaPredicted RBP6.59□□□□□ -1.35
COL4A3BP-202ENST00000357457 BDKRB2P30411 391 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms