RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PMS2P11Q13670 270 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 CCDC144NLQ6NUI1 221 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 SLC23A3Q6PIS1 610 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 MOGAT3Q86VF5 341 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 ZNF519Q8TB69 540 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 WFDC6Q9BQY6 131 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 TMPRSS2O15393 492 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 USF1P22415 310 aaPredicted RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 HOXA6P31267 233 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 SULT1A2P50226 295 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 CTHRC1Q96CG8 243 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 ZNF385AQ96PM9 386 aaKnown RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 GPR132Q9UNW8 380 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 PRF1P14222 555 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 COX7A1P24310 79 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 IFITM3Q01628 133 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 NHLH1Q02575 133 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 NHLH2Q02577 135 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 PIGYQ3MUY2 71 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 LHFPL5Q8TAF8 219 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 PKIBQ9C010 78 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 KLHDC2Q9Y2U9 406 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 C16orf97H3BN30 126 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 SFTPCP11686 197 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 B2MP61769 119 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 GCSAMQ8N6F7 178 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
COL9A1-202ENST00000357250 Q8WTZ3 238 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 LPAR5Q9H1C0 372 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 GSX1Q9H4S2 264 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-202ENST00000357250 FAM90A27PA6NNH2 459 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 C4orf51C9J302 202 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 J3QW42 95 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 ORM2P19652 201 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 FGF8P55075 233 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-202ENST00000357250 LYZP61626 148 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 DLK1P80370 383 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 PSG5Q15238 335 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 PITPNC1Q9UKF7 332 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 GNG7O60262 68 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 ELOBQ15370 118 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 OVCH2Q7RTZ1 564 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 UPK3AO75631 287 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 FAM87AP0C7U9 286 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
COL9A1-202ENST00000357250 LILRB1Q8NHL6 650 aaPredicted RBP10.22□□□□□ -0.77
COL9A1-202ENST00000357250 ZPLD1Q8TCW7 415 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 HARBI1Q96MB7 349 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 KCNK7Q9Y2U2 307 aa10.22□□□□□ -0.77
COL9A1-202ENST00000357250 H3BQ15 152 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 M0QZK8 103 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 RAB29O14966 203 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 GGCTO75223 188 aaKnown RBP10.21□□□□□ -0.77
COL9A1-202ENST00000357250 OR5AL1P0C617 328 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 MGAT2Q10469 447 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 MDP1Q86V88 176 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 AHRRA9YTQ3 701 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 ZNF253O75346 499 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 PTBP3O95758 552 aaKnown RBP10.21□□□□□ -0.77
COL9A1-202ENST00000357250 P01737 135 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 ZXDAP98168 799 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 PSG4Q00888 419 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 HLA-DRB5Q30154 266 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 FHL5Q5TD97 284 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 OR4P4Q8NGL7 312 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 BLNKQ8WV28 456 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 GDF15Q99988 308 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
COL9A1-202ENST00000357250 BET1LQ9NYM9 111 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 WIPI2Q9Y4P8 454 aa10.21□□□□□ -0.77
COL9A1-202ENST00000357250 IGHV1-45A0A0A0MS14 117 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 ADAM11O75078 769 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 IGHMP01871 453 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 SELENOTP62341 195 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 KRTCAP3Q53RY4 240 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 OR5R1Q8NH85 324 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 MRPL30Q8TCC3 161 aaKnown RBP10.21□□□□□ -0.78
COL9A1-202ENST00000357250 IL22RA2Q969J5 263 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 RASL11BQ9BPW5 248 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 RCC2Q9P258 522 aaKnown RBP10.21□□□□□ -0.78
COL9A1-202ENST00000357250 INSIG2Q9Y5U4 225 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 HELTA6NFD8 242 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF716A6NP11 495 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 NEURL1O76050 574 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 PRSS12P56730 875 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 C10orf113Q5VZT2 155 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 LRP11Q86VZ4 500 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 EIF4E3Q8N5X7 224 aaKnown RBP10.21□□□□□ -0.78
COL9A1-202ENST00000357250 OR1B1Q8NGR6 318 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 NPAS1Q99742 590 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM222Q9H0R3 208 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 NPVFQ9HCQ7 196 aa10.21□□□□□ -0.78
COL9A1-202ENST00000357250 TUBD1Q9UJT1 453 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms