RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 PNKDQ8N490 385 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 LEUTXA8MZ59 168 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 CALHM1Q8IU99 346 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 PSCAO43653 123 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 CA2P00918 260 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 C1QBP02746 253 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 C12orf57Q99622 126 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 BCL2L10Q9HD36 194 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 LPAR3Q9UBY5 353 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
LMBR1-201ENST00000353442 TEPPQ6URK8 271 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
LMBR1-201ENST00000353442 ARRDC1Q8N5I2 433 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 EVX1P49640 407 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 CHAC2Q8WUX2 184 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 HDHD3Q9BSH5 251 aaPredicted RBP11.72□□□□□ -0.53
LMBR1-201ENST00000353442 IGHV3OR16-8A0A075B7F1 116 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 CTGFP29279 349 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 ZG16BQ96DA0 208 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 IL36RNQ9UBH0 155 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 CBY1Q9Y3M2 126 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 DUXBA0A1W2PPF3 345 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 ISLRO14498 428 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 TSPAN13O95857 204 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 HLA-DRB3P79483 266 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 TMEM30AQ9NV96 361 aa11.72□□□□□ -0.53
LMBR1-201ENST00000353442 LMX1BO60663 402 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 KBTBD11O94819 623 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 DNAL4O96015 105 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 UCP2P55851 309 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 NUTF2P61970 127 aaKnown RBP11.71□□□□□ -0.53
LMBR1-201ENST00000353442 LY6DQ14210 128 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CRYGNQ8WXF5 182 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 HSPB7Q9UBY9 170 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 SIGLEC7Q9Y286 467 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 A6NJY4 79 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CLDN34H7C241 214 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CLDN20P56880 219 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 MRM1Q6IN84 353 aaKnown RBP11.71□□□□□ -0.53
LMBR1-201ENST00000353442 NKX2-2O95096 273 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CST2P09228 141 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 SP9P0CG40 484 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 SAA1P0DJI8 122 aaPredicted RBP11.71□□□□□ -0.53
LMBR1-201ENST00000353442 TMEM177Q53S58 311 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 MANBALQ9NQG1 85 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 OR2A4O95047 310 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CD69Q07108 199 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 OR2A7Q96R45 310 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 SLC52A3Q9NQ40 469 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 TMEM38BQ9NVV0 291 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 FUT9Q9Y231 359 aa11.71□□□□□ -0.53
LMBR1-201ENST00000353442 CTSSP25774 331 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 CADM3Q8N126 398 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 MYH7BA7E2Y1 1941 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 TSPAN2O60636 221 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 CEACAM4O75871 244 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 STPG3Q8N7X2 389 aa11.71□□□□□ -0.54
LMBR1-201ENST00000353442 C7orf71A4D174 169 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■■□□ 19.2
LMBR1-201ENST00000353442 IGLV3-27P01718 113 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 DHRS2Q13268 280 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 WNT5BQ9H1J7 359 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 A0A1B0GV72 72 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 RAE1P78406 368 aaKnown RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 CTAG2O75638 210 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 IGHV3-11P01762 117 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 FAM168AQ92567 244 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 LYRM2Q9NU23 88 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.546e-7■■■■■ 27.2
LMBR1-201ENST00000353442 EFNB2P52799 333 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 ZNF324BQ6AW86 544 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-201ENST00000353442 ABHD12Q8N2K0 398 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
LMBR1-201ENST00000353442 OR10J1P30954 320 aa11.69□□□□□ -0.54
LMBR1-201ENST00000353442 TRAV1-2A0A0B4J238 106 aa11.69□□□□□ -0.54
LMBR1-201ENST00000353442 RCC2Q9P258 522 aaKnown RBP11.69□□□□□ -0.54
LMBR1-201ENST00000353442 J3QT63 122 aa11.69□□□□□ -0.54
LMBR1-201ENST00000353442 SPNP16150 400 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms