RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ZNF343Q6P1L6 599 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TBC1D26Q86UD7 250 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF610Q8N9Z0 462 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 OR5C1Q8NGR4 320 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 RAB39BQ96DA2 213 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 GGACTQ9BVM4 153 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 OPN3Q9H1Y3 402 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 GLRX2Q9NS18 164 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 IL36GQ9NZH8 169 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ROS1P08922 2347 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 DIDO1Q9BTC0 2240 aaKnown RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 hCG_38984A0A1B0GV85 526 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 H0YL77 283 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 HSD17B6O14756 317 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CST7O76096 145 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 NGFP01138 241 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 EPHA1P21709 976 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 FUT6P51993 359 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 RUNX1Q01196 453 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 SP5Q6BEB4 398 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM211Q6ICI0 200 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 PIGCQ92535 297 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM56Q96MV1 263 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 PAPOLGQ9BWT3 736 aaKnown RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 LYRM2Q9NU23 88 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM56-RWDD3S4R434 201 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 MBD3L4A6NDZ8 208 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 MBD3L3A6NE82 208 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 MBD3L5A6NJ08 208 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SLC33A1O00400 549 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ADAM20O43506 726 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 NXPH3O95157 252 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 RD3LP0DJH9 198 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 HOXA5P20719 270 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 FUT3P21217 361 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 KIAA0141Q14154 515 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ELOBQ15370 118 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 OR8B8Q15620 311 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 NRN1LQ496H8 165 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 PLCXD3Q63HM9 321 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF818PQ6ZRF7 136 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF695Q8IW36 515 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM217Q8N7C4 229 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF611Q8N823 705 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 MBD3L2Q8NHZ7 208 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 Q8WTZ3 238 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 TOLLIPQ9H0E2 274 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 PLEKHF2Q9H8W4 249 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 GP6Q9HCN6 339 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 KIAA1456Q9P272 454 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SLC7A11Q9UPY5 501 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 PLCE1Q9P212 2302 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 CXCL1P09341 107 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 CCNOP22674 350 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 TAGLN2P37802 199 aaKnown RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 DYNLT3P51808 116 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 ERVFRD-1P60508 538 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 DLK1P80370 383 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SPIN3Q5JUX0 258 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SLC25A26Q70HW3 274 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 MDP1Q86V88 176 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 DOLPP1Q86YN1 238 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 SELENOHQ8IZQ5 122 aaKnown RBP7.3□□□□□ -1.24
TRIM55-204ENST00000353317 CYB561D1Q8N8Q1 229 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 OR8G5Q8NG78 346 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 URGCP-MRPS24S4R325 110 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 CFAP46Q8IYW2 2715 aa7.3□□□□□ -1.24
TRIM55-204ENST00000353317 C5orf49A4QMS7 147 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 CRYABP02511 175 aaKnown RBP7.29□□□□□ -1.24
TRIM55-204ENST00000353317 SCTP09683 121 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 WNT5AP41221 380 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 UBE2KP61086 200 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 SRPXP78539 464 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 ICAM4Q14773 271 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 GABRA6Q16445 453 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 FAM180AQ6UWF9 173 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 UNQ6494/PRO21346Q6UXR6 183 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 COLCA1Q6ZS62 124 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 DPPA2Q7Z7J5 298 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 GAPTQ8N292 157 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 POM121L2Q96KW2 1035 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 UNKLQ9H9P5 680 aaKnown RBP7.29□□□□□ -1.24
TRIM55-204ENST00000353317 PLSCR4Q9NRQ2 329 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 DOK5Q9P104 306 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 IGSF10Q6WRI0 2623 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 USP24Q9UPU5 2620 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 IGKV1D-13A0A0B4J2D9 117 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 BTBD17A6NE02 478 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF732B4DXR9 585 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 HSPA12AO43301 675 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 AGFG2O95081 481 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 SCAF4O95104 1147 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms