RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PRTGQ2VWP7 1150 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 TCTEX1D1Q8N7M0 179 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ZNF501Q96CX3 271 aaPredicted RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 KCNK17Q96T54 332 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 IGHV2-26A0A0B4J1V2 119 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 EDDM13A0A1B0GTR0 161 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 ZNF891A8MT65 544 aaPredicted RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 NPIPA2E9PIF3 369 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 MS4A18H0YCH9 400 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 MLNRO43193 412 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 ZNF253O75346 499 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 PPYP01298 95 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 ACRP10323 421 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 GP1BBP13224 206 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 GLB1P16278 677 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 OR1D4P47884 311 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 AMTP48728 403 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 NSDHLQ15738 373 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 MS4A18Q3C1V0 323 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 DOK3Q7L591 496 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 ZNF525Q8N782 197 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 TDRD6O60522 2096 aaKnown RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 FAM166BA8MTA8 275 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 NPIPB7O75200 414 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 PMCHP20382 165 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 PLPPR5Q32ZL2 321 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 NXF5Q9H1B4 397 aaKnown RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 UBE2ZQ9H832 354 aaPredicted RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
IFT88-202ENST00000351808 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
IFT88-202ENST00000351808 DPRXA6NFQ7 191 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 RER1O15258 196 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 TNFSF14O43557 240 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 SAP30O75446 220 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 NRASP01111 189 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 KRASP01116 189 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 VDAC1P21796 283 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 CDAP32320 146 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 NIT1Q86X76 327 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 ZIC4Q8N9L1 334 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 ZNF114Q8NC26 417 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 ADAMTS9Q9P2N4 1935 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 GOSR1O95249 250 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 FRMD6-AS1P0C7T7 363 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 IAPPP10997 89 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 PSG4Q00888 419 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 GPM6BQ13491 265 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 LRRC75BQ2VPJ9 315 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 DEFB110Q30KQ9 67 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 MOB1AQ9H8S9 216 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 OR2T8A6NH00 312 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.59
IFT88-202ENST00000351808 C3orf79P0CE67 100 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
IFT88-202ENST00000351808 PDCD1Q15116 288 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 RSPO4Q2I0M5 234 aaPredicted RBP11.34□□□□□ -0.59
IFT88-202ENST00000351808 HAPLN4Q86UW8 402 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 DTX1Q86Y01 620 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 NUDT22Q9BRQ3 303 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 DERL1Q9BUN8 251 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
IFT88-202ENST00000351808 GAGE12BA1L429 117 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
IFT88-202ENST00000351808 CRYAAP02489 173 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 CD99P14209 185 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 ARR3P36575 388 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 CLDN18P56856 261 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 FUT7Q11130 342 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 KIR2DS3Q14952 304 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 TMEM108Q6UXF1 575 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 FCN1O00602 326 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 IL12BP29460 328 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 CAPZBP47756 277 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 GABRA2P47869 451 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 GFRA1P56159 465 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 RD3Q7Z3Z2 195 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 FGF14Q92915 247 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 CCDC3Q9BQI4 270 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 PRTFDC1Q9NRG1 225 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
IFT88-202ENST00000351808 RALGAPA1Q6GYQ0 2036 aa11.33□□□□□ -0.6
IFT88-202ENST00000351808 KNL1Q8NG31 2342 aa11.32□□□□□ -0.6
IFT88-202ENST00000351808 KIAA1324LA8MWY0 1029 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms