RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 MIDNQ504T8 468 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 TMEM171Q8WVE6 324 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 SUCNR1Q9BXA5 334 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 TSPAN15O95858 294 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 SEC11BP0C7V7 166 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 KITLGP21583 273 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 GNLYP22749 145 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 GLRXP35754 106 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 SNCAP37840 140 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 ASCL1P50553 236 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 PPT1P50897 306 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
UBA3-201ENST00000349511 MKXQ8IYA7 352 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 OR2Z1Q8NG97 314 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 MSI2Q96DH6 328 aaKnown RBP11.32□□□□□ -0.6
UBA3-201ENST00000349511 MRPL37Q9BZE1 423 aaKnown RBP11.32□□□□□ -0.6
UBA3-201ENST00000349511 SLC2A9Q9NRM0 540 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 SMCO4Q9NRQ5 59 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
UBA3-201ENST00000349511 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 AKR1C3P42330 323 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 C12orf57Q99622 126 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 GINS3Q9BRX5 216 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 ZNF286AQ9HBT8 521 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 IL36GQ9NZH8 169 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 ANKHD1Q8IWZ3 2542 aaKnown RBP11.31□□□□□ -0.6
UBA3-201ENST00000349511 ABCA4P78363 2273 aa11.31□□□□□ -0.6
UBA3-201ENST00000349511 A6NLC8 198 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 SPRY3O43610 288 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 DANCRP0C864 163 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 P2RY1P47900 373 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
UBA3-201ENST00000349511 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 Q6ZPA2 131 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 LGI3Q8N145 548 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 CLCC1Q96S66 551 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 ATP23Q9Y6H3 246 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 LRP5LA4QPB2 252 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 PHF1O43189 567 aaPredicted RBP11.3□□□□□ -0.6
UBA3-201ENST00000349511 FOLR2P14207 255 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 PTAFRP25105 342 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 CAMLGP49069 296 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 UCP3P55916 312 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 FGF12P61328 243 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 TLE1Q04724 770 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 IL24Q13007 206 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 IL13RA2Q14627 380 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 HMGN3Q15651 99 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 GUK1Q16774 197 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 C15orf54Q8N8G6 183 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 TAAR3PQ9P1P4 343 aa11.3□□□□□ -0.6
UBA3-201ENST00000349511 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
UBA3-201ENST00000349511 RCL1Q9Y2P8 373 aaKnown RBP11.3□□□□□ -0.6
UBA3-201ENST00000349511 J3QT63 122 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 HS3ST1O14792 307 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 WNT9BO14905 357 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 PDCD6O75340 191 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 PRB1P04280 392 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 AADACP22760 399 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 FHITP49789 147 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 NHLH2Q02577 135 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 HABP2Q14520 560 aaPredicted RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 COMMD1Q8N668 190 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 ZNF442Q9H7R0 627 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 IGHV3-13P01766 116 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 TUBG1P23258 451 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 PAX6P26367 422 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 GLP1RP43220 463 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 C11orf53Q8IXP5 236 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 ZCCHC24Q8N2G6 241 aaKnown RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
UBA3-201ENST00000349511 TUBG2Q9NRH3 451 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms