RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 C5orf24Q7Z6I8 188 aa17.73■□□□□ 0.43
SNX3-202ENST00000349379 TMEM219Q86XT9 240 aa17.73■□□□□ 0.43
SNX3-202ENST00000349379 TOMM40LQ969M1 308 aa17.73■□□□□ 0.43
SNX3-202ENST00000349379 RPEQ96AT9 228 aa17.73■□□□□ 0.43
SNX3-202ENST00000349379 VCX3AQ9NNX9 186 aa17.73■□□□□ 0.43
SNX3-202ENST00000349379 LOC100506127A0A0U1RQW1 187 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 FAM90A9PA6NNJ1 464 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 HAX1O00165 279 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 RAB27BO00194 218 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 ZNF816Q0VGE8 651 aaPredicted RBP17.72■□□□□ 0.43
SNX3-202ENST00000349379 DIAPH2-AS1Q14236 149 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 MOGAT2Q3SYC2 334 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 FBLN7Q53RD9 439 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 SFXN4Q6P4A7 337 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 SLC25A48Q6ZT89 311 aaKnown RBP17.72■□□□□ 0.43
SNX3-202ENST00000349379 MOB1BQ7L9L4 216 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 PRR18Q8N4B5 295 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 OR10X1Q8NGY0 326 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 CFHR4Q92496 578 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 ST6GALNAC6Q969X2 333 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 NPFFR1Q9GZQ6 430 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 GNG12Q9UBI6 72 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 JPT1Q9UK76 154 aa17.72■□□□□ 0.43
SNX3-202ENST00000349379 SLC31A2O15432 143 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 MNDAP41218 407 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 RAB7AP51149 207 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 ZNF134P52741 427 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 ZNF137PP52743 207 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 TIMM50Q3ZCQ8 353 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 LY6G6FQ5SQ64 297 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 STEAP3Q658P3 488 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 C16orf82Q7Z2V1 217 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 OR8H3Q8N146 312 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 OR4C13Q8NGP0 309 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 HDHD3Q9BSH5 251 aaPredicted RBP17.71■□□□□ 0.43
SNX3-202ENST00000349379 KCNK7Q9Y2U2 307 aa17.71■□□□□ 0.43
SNX3-202ENST00000349379 MFNGO00587 321 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 CLEC2LP0C7M8 214 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 HABP2Q14520 560 aaPredicted RBP17.7■□□□□ 0.42
SNX3-202ENST00000349379 MORN2Q502X0 79 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 CT45A1Q5HYN5 189 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 Q8N2B8 174 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 OR10V1Q8NGI7 309 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 OR10R2Q8NGX6 335 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 CT45A3Q8NHU0 189 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 ZNF702PQ9H963 129 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 C12orf4Q9NQ89 552 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 OR2S2Q9NQN1 319 aa17.7■□□□□ 0.42
SNX3-202ENST00000349379 HSD17B6O14756 317 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 TIMM23O14925 209 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 YPEL1O60688 119 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 SMIM18P0DKX4 95 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 CD24P25063 80 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 KRTAP10-3P60369 221 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 GNMTQ14749 295 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 THNSL2Q86YJ6 484 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 OR52L2PQ8NGH6 319 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 GALMQ96C23 342 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 RAB3CQ96E17 227 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 YPEL2Q96QA6 119 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 CHMP1AQ9HD42 196 aaPredicted RBP17.69■□□□□ 0.42
SNX3-202ENST00000349379 Q9N2K0 584 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 DAPK2Q9UIK4 370 aa17.69■□□□□ 0.42
SNX3-202ENST00000349379 METTL21EPA6NDL7 271 aa17.68■□□□□ 0.42
SNX3-202ENST00000349379 MXD1Q05195 221 aa17.68■□□□□ 0.42
SNX3-202ENST00000349379 DTX3Q8N9I9 347 aa17.68■□□□□ 0.42
SNX3-202ENST00000349379 CITED1Q99966 193 aa17.68■□□□□ 0.42
SNX3-202ENST00000349379 CMSS1Q9BQ75 279 aaKnown RBP17.68■□□□□ 0.42
SNX3-202ENST00000349379 MGAT4AQ9UM21 535 aa17.68■□□□□ 0.42
SNX3-202ENST00000349379 AIREO43918 545 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 OR2F2O95006 317 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 GAPDHP04406 335 aaKnown RBP17.67■□□□□ 0.42
SNX3-202ENST00000349379 HIST1H1DP16402 221 aaKnown RBP17.67■□□□□ 0.42
SNX3-202ENST00000349379 IL3RAP26951 378 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 SCAND1P57086 179 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 HLA-DRB3P79483 266 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 C11orf88Q6PI97 169 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 DRAM1Q8N682 238 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 OR56B4Q8NH76 319 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 RBM14Q96PK6 669 aaKnown RBP17.67■□□□□ 0.42
SNX3-202ENST00000349379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNX3-202ENST00000349379 ABRACLQ9P1F3 81 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 SIGLEC9Q9Y336 463 aa17.67■□□□□ 0.42
SNX3-202ENST00000349379 IGHV1-3A0A0C4DH29 117 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 SNRPBP14678 240 aaKnown RBP17.66■□□□□ 0.42
SNX3-202ENST00000349379 PPP1CCP36873 323 aaKnown RBP17.66■□□□□ 0.42
SNX3-202ENST00000349379 SRSF4Q08170 494 aaKnown RBP17.66■□□□□ 0.42
SNX3-202ENST00000349379 OR2T6Q8NHC8 308 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 SETD6Q8TBK2 473 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 LGALS14Q8TCE9 139 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 RTN4IP1Q8WWV3 396 aaPredicted RBP17.66■□□□□ 0.42
SNX3-202ENST00000349379 SLC25A33Q9BSK2 321 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 ABHD14AQ9BUJ0 271 aa17.66■□□□□ 0.42
SNX3-202ENST00000349379 SERPINE3A8MV23 424 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 TMEM127O75204 238 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 RGS11O94810 467 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 SNRNP70P08621 437 aaKnown RBP17.65■□□□□ 0.42
SNX3-202ENST00000349379 GNB3P16520 340 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 TGFBR1P36897 503 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 BLCAPP62952 87 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms